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SCNpilot_expt_1000_bf_scaffold_4466_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4466_curated_1
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1191)
DNA (1191bp) protein (397aa)
GMC oxidoreductase {ECO:0000313|EMBL:CDX36293.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
GMC oxidoreductase n=1 Tax=Saccharopolyspora spinosa RepID=Q6JHM2_9PSEU rbh
putative Choline dehydrogenase and related flavoprotein rbh
SCNpilot_expt_1000_bf_scaffold_4466_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1222..2193)
DNA (972bp) protein (324aa)
Methyl-galactoside transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX36258.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ATPase n=1 Tax=Burkholderia bryophila RepID=UPI00036B0D1B rbh
Ribose transport system permease protein rbsC, putative (EC:3.6.3.17)
SCNpilot_expt_1000_bf_scaffold_4466_curated_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2195..3145)
DNA (951bp) protein (317aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:CDX13787.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G540_9BURK
monosaccharide-transporting ATPase (EC:3.6.3.17); K10440 ribose transport system permease protein
SCNpilot_expt_1000_bf_scaffold_4466_curated_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3142..4686)
DNA (1545bp) protein (515aa)
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CDX36284.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ABC transporter related n=1 Tax=Burkholderia graminis C4D1M RepID=B1G539_9BURK rbh
monosaccharide-transporting ATPase (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
SCNpilot_expt_1000_bf_scaffold_4466_curated_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4750..5961)
DNA (1212bp) protein (404aa)
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:CDX36268.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=uncultured bacterium RepID=K2ACL5_9BACT rbh
ribose ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_4466_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6753..7010
DNA (258bp) protein (86aa)
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:CDX36270.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_4466_curated_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7014..7979
DNA (966bp) protein (322aa)
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CDX13780.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein alpha-subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXG1_THERP
SCNpilot_expt_1000_bf_scaffold_4466_curated_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7981..9924
DNA (1944bp) protein (648aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX13779.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Putative Fe-S oxidoreductase n=3 Tax=Vibrio nigripulchritudo RepID=U4EM92_9VIBR rbh
putative Fe-S oxidoreductase rbh
SCNpilot_expt_1000_bf_scaffold_4466_curated_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10015..10935
DNA (921bp) protein (307aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDG4_9RHIZ rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CCV15282.1}; EC=1.1.1.31 {ECO:0000313|EMBL:CCV15282.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4466_curated_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10939..11727
DNA (789bp) protein (263aa)
Beta-lactamase domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FLY5_9RHIZ rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:CCV15284.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
beta-lactamase domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_4466_curated_11
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11866..12681)
DNA (816bp) protein (272aa)
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IUS8_9BURK rbh
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EIF34480.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
atrC; putative amino acid ABC transporter ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_4466_curated_12
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12678..13064)
DNA (387bp) protein (129aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IUS7_9BURK
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EIF34479.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
Inner membrane amino-acid ABC transporter permease
Displaying 12 items

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