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SCNpilot_expt_1000_bf_scaffold_4466_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4750..5961)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:CDX36268.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 404.0
  • Bit_score: 671
  • Evalue 9.50e-190
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=uncultured bacterium RepID=K2ACL5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 381.0
  • Bit_score: 352
  • Evalue 6.90e-94
  • rbh
ribose ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 279.0
  • Bit_score: 155
  • Evalue 3.90e-35

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGTCCTTGAAGAATATTCTCGACACGAAGATTTCCCGAAAGTCGTTTCTGCGGGGCGTGCCCGGTGCCGCGGCCATGGCGGCCCTGCCGGGTATGCAGCTTGCCAGCGCGACGCGCGCCGCCGCCGAAACCACGACGGGCAAGAAGGCCGGCTACTACGGTGCGCCGCGCACCTGGATGTGGAACCCGAACCCCAACACCATGATCGACACGTCCAAGTGGAAGAAGGACGGTCCCTATGTCATCGGCTTTTCCAACGCCTCGATCTCCAATGCCTGGCGCGTCGCCTTCCAGCATGGCGTGCTGTGGGCGGCAGGCGAGCATCGCGACGACATTTCCCGCCTTCTCGTGACGGACGCCAATGACGATCCGTCCAAGCAGATCGCGGACATCCAGGACCTCATCAGCCAGGGCGTGGACCTGCTGCTGATCGCCGCGGCGACGGAGGATGCGCTCGATTCCATCGTCGGCCGTGCGACCGAACAGGGTATCCCGGTCGTCATGGTGGACCGGAAGGTCAAGACGCCCGAGAACTACATCACCTATGTGACGGCATCCGACTGGGCGCTCGGCCGCCTGGAGGCCCAGTGGCTCTGTGAGACGCTCGGCGGCAAGGGCAACATCGTCATGCTGCCGGGCATTGCGGGCTCCAGCGTCGCGGAAATCCGCATCAAGGCGAACGAGGAGGTCTTCTCCAAATTCCCCGATATCAAGGTGCTGGAAAAGCAGTATTGCGACTGGAACCCGGCGACCGGCAAATCGGTCATGGCCGCGCTCATCCAGAAATACGGCAAGGACATCGACGGCGTGCTCGCCGACAGCGCTCTGCAGGGCTACGGCGCGATCGAGGCCTATCTCGATGCCGGCTACAAGGCGGGCGAGATTCCGCCGATGACAGGCGGCGACGTGGCGCGCATGTACCAGCTCGCCAACCAGCACGACATCAAGATGTGCGGCATCGACTATCCGACGTCGATGGGCATCACCGGCATCGAGACCGCGCTCGACGTGCTCAAGGGCATCCCGGTTCCGGACAAGGTCGAGGTGAGCTTCCAGGTCGTGACGTCGCCGGACGGGGACACCGTTTCCGTCAGGGGCGACCGGCATATCCTCGACCATGTCAGCATGGACGATCCGGGCGACCTGTCGCCGAGCCACGGCCTGCCGGACGGGTACAATCCGAGCACGTTCAATCCCGACTATCCGAAATAA
PROTEIN sequence
Length: 404
MSLKNILDTKISRKSFLRGVPGAAAMAALPGMQLASATRAAAETTTGKKAGYYGAPRTWMWNPNPNTMIDTSKWKKDGPYVIGFSNASISNAWRVAFQHGVLWAAGEHRDDISRLLVTDANDDPSKQIADIQDLISQGVDLLLIAAATEDALDSIVGRATEQGIPVVMVDRKVKTPENYITYVTASDWALGRLEAQWLCETLGGKGNIVMLPGIAGSSVAEIRIKANEEVFSKFPDIKVLEKQYCDWNPATGKSVMAALIQKYGKDIDGVLADSALQGYGAIEAYLDAGYKAGEIPPMTGGDVARMYQLANQHDIKMCGIDYPTSMGITGIETALDVLKGIPVPDKVEVSFQVVTSPDGDTVSVRGDRHILDHVSMDDPGDLSPSHGLPDGYNPSTFNPDYPK*