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SCNpilot_expt_1000_bf_scaffold_4466_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12678..13064)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IUS7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 114.0
  • Bit_score: 163
  • Evalue 1.90e-37
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EIF34479.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 114.0
  • Bit_score: 163
  • Evalue 2.70e-37
Inner membrane amino-acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 113.0
  • Bit_score: 148
  • Evalue 1.50e-33

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Taxonomy

Burkholderia sp. Ch1-1 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GGTCGATCCGTCGATCCGGGGCAGCGCGAGGCGGCACAATCGCTTGGAATGTCGCCCGCCCACACGCTGCGCCGTATCATCATTCCCCAGGCGCTGCGCGTCATCGTTCCGCCGACCGGGAACGAGGTCATCGGCATGCTGAAGGCGACCTCGCTGGTCAGCGTGCTGTCGATCTCGGACCTGCTCTATTCCGTGCAGGGCATCTATGGCCGGACGCTGCAGACCATTCCGCTGCTGATCGTCGCATCGATCTGGTATCTCGCGGCGGCGACGATCCTGACCTCCATCCAGAGGCTGATCGAGAAGCACTACGGTCGTGGCCACCGCTCCAACCAGCCGGATGCGCTGTTCGGCCTCCTGCGCGCCAGAAGAAAGGAGACGACGTGA
PROTEIN sequence
Length: 129
GRSVDPGQREAAQSLGMSPAHTLRRIIIPQALRVIVPPTGNEVIGMLKATSLVSVLSISDLLYSVQGIYGRTLQTIPLLIVASIWYLAAATILTSIQRLIEKHYGRGHRSNQPDALFGLLRARRKETT*