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SCNpilot_expt_1000_bf_scaffold_12612_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3561..4508

Top 3 Functional Annotations

Value Algorithm Source
Alcohol dehydrogenase, zinc-containing n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEX9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 316.0
  • Bit_score: 497
  • Evalue 8.00e-138
  • rbh
NADPH:quinone reductase {ECO:0000313|EMBL:EYR80152.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 316.0
  • Bit_score: 497
  • Evalue 1.10e-137
zinc-containing alcohol dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 321.0
  • Bit_score: 355
  • Evalue 1.50e-95
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCTTCGTGCCGTTGTTAGAGCGTTCGGCGATCCCCGGCAAGCGGTCGGCCTGGAAGAGGCGGAGCGGGCGGCGCCGGGCGCCGGCGCGGTGGAAATCCGCATCCGCCGCGCCGCGATCAATCCATCCGACCTCATCCCCGTCACCGGCGCCTATCGCAGCCGCACCACCCTGCCCTTCGTGCCCGGCTTCGAGGGTGTCGGGGACATCGTGCGCCTCGGCGAGGGCGTGACGGATCTTGCCATCGGCCGGCGCGTTCTGCCGATCGGCGCCAGCGGGCTCTGGCAGCAATACCTCGTCCGCCCGGCGGACTGGTGCCTTGCCGTGCCGGATGACCTTTCCGACGATGAGGCCGCCATGGCCTATGTGAACCCGCTGACGGCCTTCCGGCTGATCGATGCGGCCGAGGCGCATTTCGGCACGGCCGGCGGCCGGCGGATCGGCGTTACCGCCGCGGCTTCCGCCATCGGGCGAATGCTGCTGGTGCTGCTTGCGGAGGCGGGCTTCCGGCCTGTCGCGCTGGTGCGGAGCGCCGCGACGGCGGCGCGGCTTGGCGAAAGCTTCAGCGGGGAGATCCTCACGCAGCCCGCGCCGCTCGACGGCGTGCTCGACGCGGTGGGCGGGGCGCCGGGCGATGCGCTGTTCCGGCAGGTCCGGCCCGGCGGCGCCTTCATCCAGTACGGCGCGCTTTCCGGCGCGCAGCTCGACCCGGCGTTGGTGACGGCGCGGCGGGACGAGGTTGCGTTCTCCTTCCTGTGGCTGCGCAACTGGGTGCATTCCGCCCCGCGCGCCGCCATCGAGGCCGCCTTTTCGCGGAGCTTTTCAGGCATCCGCGCCGGCTTTCTCGCCTGCGAGATCGACGGCGTTTTCGCCCTTGGCGACCTTGCCGCAGCGCTCGCCCGGCAGGACGATCCGGAACGCAGGGGCAAGGTCCTGCTTGCGCCCTGA
PROTEIN sequence
Length: 316
MLRAVVRAFGDPRQAVGLEEAERAAPGAGAVEIRIRRAAINPSDLIPVTGAYRSRTTLPFVPGFEGVGDIVRLGEGVTDLAIGRRVLPIGASGLWQQYLVRPADWCLAVPDDLSDDEAAMAYVNPLTAFRLIDAAEAHFGTAGGRRIGVTAAASAIGRMLLVLLAEAGFRPVALVRSAATAARLGESFSGEILTQPAPLDGVLDAVGGAPGDALFRQVRPGGAFIQYGALSGAQLDPALVTARRDEVAFSFLWLRNWVHSAPRAAIEAAFSRSFSGIRAGFLACEIDGVFALGDLAAALARQDDPERRGKVLLAP*