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SCNpilot_expt_1000_bf_scaffold_12612_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12612_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..140
DNA (138bp) protein (46aa)
Biotin transporter BioY n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETM7_9RHIZ
Biotin transporter BioY {ECO:0000313|EMBL:EYR83110.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_12612_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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145..1629
DNA (1485bp) protein (495aa)
O-succinylbenzoate--CoA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCD9_9RHIZ rbh
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EYR83111.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acetyl-CoA synthetase rbh
SCNpilot_expt_1000_bf_scaffold_12612_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2045..2749
DNA (705bp) protein (235aa)
Acety-CoA acetytransferase {ECO:0000313|EMBL:EYR80149.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Main chromosome, complete sequence n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A1X3_RHIFH rbh
SCNpilot_expt_1000_bf_scaffold_12612_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2758..3153
DNA (396bp) protein (132aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLW6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80150.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
S-(hydroxymethyl)glutathione synthase
SCNpilot_expt_1000_bf_scaffold_12612_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3139..3540)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CH33_9RHIZ
(3S)-malyl-CoA thioesterase {ECO:0000313|EMBL:EYR80151.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
SCNpilot_expt_1000_bf_scaffold_12612_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3561..4508
DNA (948bp) protein (316aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEX9_9RHIZ rbh
NADPH:quinone reductase {ECO:0000313|EMBL:EYR80152.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
zinc-containing alcohol dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_12612_curated_7
unknown

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comp(4383..4949)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12612_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5047..5487
DNA (441bp) protein (147aa)
Deacetylase, histone deacetylase/acetoin utilization protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BX30_9RHIZ
Deacetyase {ECO:0000313|EMBL:EYR80153.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative deacetylase
Displaying 8 items

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