ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7026_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3482..4297)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTJ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 272.0
  • Bit_score: 443
  • Evalue 2.00e-121
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79689.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 272.0
  • Bit_score: 443
  • Evalue 2.80e-121
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 271.0
  • Bit_score: 282
  • Evalue 1.10e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
TTGAAGGCCCGGCTCGCCGAGACCACCGCGGCACCCCCCGTCGATCTGCAGCCGATCGAGACCCGCCTTGCCGCGCTGGAAAAATCGGCAGGTGAAAACAGTGGCACGCCCAGTGCGGACCCGGAATCCGTCGGCAGGCTGGAAGGGGACGTCGCCCGGCTGACGACGGAGCTCGCCGCGCTGCGCGAGGCCGTTGGCCGCACCAGCGAGGCGGTCAGCACGACGGAAAGCCAGCTCACCGAACGCATCGCCGCCGCCGAGCAGAAGCTCGACGAGCCGCGCAGCGACATCGCGATGGCCCGTGCCGTGGCCGCAAGCGCGCTGAAGACCGCCATCGACCGCGGCGGCCCCTACCTCGCCGAGCTGGAGGCCTTCGCCAGCGTCGCGCCGGACGATCCGTCCATCGCGGGCCTGCGCGAACATGCGGCCATCGGCGTGCCCTCGCGCGCCGACCTCGTGCGCGATTTCCAGCCGACGGCCGACGCCATCCTCGACGCCGTGCACCAGCCCGAGGGAGACCAGGGCATCTTCAACCGCCTGATGTCGAGCGCCGCCTCGGCGATCCGCGTCCGCCCGGTCGGCAGCGTGGAGGGCGATACGCCCGAGGCCGTCGTCGCCCGCATCGAGAACAAGCTGCAGAACGGCGACTTCAAGGGCGCTGATATCGAATGGCAGACCCTGCCGCAGCCGGGCCAGGCCGCGGCGGCGGACTACAAGCGCAGGCTGGATGCGCGCGTCAGCGTCGAGGAACTGGTCGGCGCGGCCGTGTCCGGCGCCCTCAACGGCACGACCACCGCCACCGGCAACCAGGGCTGA
PROTEIN sequence
Length: 272
LKARLAETTAAPPVDLQPIETRLAALEKSAGENSGTPSADPESVGRLEGDVARLTTELAALREAVGRTSEAVSTTESQLTERIAAAEQKLDEPRSDIAMARAVAASALKTAIDRGGPYLAELEAFASVAPDDPSIAGLREHAAIGVPSRADLVRDFQPTADAILDAVHQPEGDQGIFNRLMSSAASAIRVRPVGSVEGDTPEAVVARIENKLQNGDFKGADIEWQTLPQPGQAAAADYKRRLDARVSVEELVGAAVSGALNGTTTATGNQG*