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SCNpilot_expt_1000_bf_scaffold_7026_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7760..8536

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 258.0
  • Bit_score: 477
  • Evalue 1.30e-131
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000369DC56 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 258.0
  • Bit_score: 367
  • Evalue 1.00e-98
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94) similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 258.0
  • Bit_score: 364
  • Evalue 2.70e-98

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGCGTGGCGCCGGCATCGTGCTCTTCGCCATGCCCTCGCAGGCGCAGCGGGCGGCGGCGCGGTCGCTGGCGCCGCTTCTTGCGCCGGGCACGGCGGTCGTCATCTGCGCCAAGGGCATGGAGAAGGGCACCGGCCGGCTCCTGACCGAGGTGCTGGAAGAGGAACTGCCCGGCCGCGAGGTCGCGGTGCTCTCCGGCCCCGGCTTCGCCGCCGATATCGCCAAAGGCCTGCCGACGGCGATGGTGATCGCCGCGCGCACGGCGGAGACCGGCGCCCTCCTGGCGCAGGCGCTCTCCGGGCCGACCTTCCGGCTCTATCCTTCGACGGACCGCATCGGCGTGCAGCTCGGCGGCGCGCTCAAGAATGTGCTGGCAATCGCCTGTGGCATCATAGAGGGCGCGGAGCTCGGCGATTCCGCCCGGGCGGCGCTGATTTCGCGCGGGCTTGCGGAGCTTTCCCGCTTCGTGGAGGCGCATGGCGGGGAGGGCATCACGGTGACGGGGCTTTCCGGCCTCGGCGACCTCGTGCTCACCGGCACCAGCCACCAGTCGCGGAACCTGCGCTTCGGCATCGCGCTCGGCCGGCACGGCACTGCCGCCGGCTGGTCCGGCGACCTTGTGGAAGGCGCCTTCGCCGCCTCGGTCGCCTCTGGAGTCGCCGCCGAAAAGGGCATCGACATGCCGATCACCGACGCCGTCGCCCGCATCGTCGACGGCACGCTCGACGTGAAGACCGCCATCGGGCAGCTCATGACGCGCCCCATCACCCAGGAATAA
PROTEIN sequence
Length: 259
MRGAGIVLFAMPSQAQRAAARSLAPLLAPGTAVVICAKGMEKGTGRLLTEVLEEELPGREVAVLSGPGFAADIAKGLPTAMVIAARTAETGALLAQALSGPTFRLYPSTDRIGVQLGGALKNVLAIACGIIEGAELGDSARAALISRGLAELSRFVEAHGGEGITVTGLSGLGDLVLTGTSHQSRNLRFGIALGRHGTAAGWSGDLVEGAFAASVASGVAAEKGIDMPITDAVARIVDGTLDVKTAIGQLMTRPITQE*