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SCNpilot_expt_1000_bf_scaffold_7026_curated_22

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 16212..16469

Top 3 Functional Annotations

Value Algorithm Source
Malate dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVY9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 86.0
  • Bit_score: 169
  • Evalue 1.40e-39
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 86.0
  • Bit_score: 169
  • Evalue 1.90e-39
mdh2; malate dehydrogenase (EC:1.1.1.37) similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 86.0
  • Bit_score: 164
  • Evalue 1.80e-38

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCCCGCAAGAAGATCGCACTTATTGGTTCTGGAATGATCGGTGGCACGCTGGCGCATCTGGCCGGCCTGAAGGAACTGGGCGACATCGTCCTCTTCGACATCGCCGACGGCGTTCCGCAGGGCAAGGGCCTCGACATCGCCCAGTCCTCGCCGGTCGAAGGCTTCAACGCCTCGCTGACGGGCGCAAGCGACTACGCCGCCATCGAAGGCGCCGATGTCTGCATCGTCACCGCCGGCGTCGCCCGCAAGCCGGGC
PROTEIN sequence
Length: 86
MARKKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGVPQGKGLDIAQSSPVEGFNASLTGASDYAAIEGADVCIVTAGVARKPG