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SCNpilot_expt_1000_bf_scaffold_9484_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1545..2609

Top 3 Functional Annotations

Value Algorithm Source
Putative SAM-dependent methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXF3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 356.0
  • Bit_score: 671
  • Evalue 3.50e-190
  • rbh
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:EYR83286.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 356.0
  • Bit_score: 671
  • Evalue 4.90e-190
SAM-dependent methyltransferase protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 363.0
  • Bit_score: 566
  • Evalue 6.50e-159
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
GTGAAGGACAGACACCGCCGGCCGAAGAGCGGCCCCGCCGCGCCGATCAAGGCCAAGGCACATGTCAGGCCGCAGGCCGCCCCGGCCCCGAAGAGGGAGCCGCGCCCCGCGCCCGAGGCGCCCGCCCGCCCGCTGATCCGCCGCGAGGGCGAAAAGCCCGCCGAGCGCGTGCCCGTCATCCTTGAAACCGCCGGCTCCGACCAGTACCGCCTCATCGACAGCGGCGCCGGCGAGAAGCTGGAGCAATACGGCCCTTATCGCATCGTCCGCCCCGAGGCGCAGGCGCTCTGGCAGCGCAGTCTGCCGGCCTCGCTCTGGGACAAGGCCGACGCCCTCTTCACCGGCGACACGGACGAGGACGGCATGGGCCGCTGGAAATTCCCGAAGGCCGCGCTCGGCGAGACCTGGCCGATGCAGCTCCTCGGCGTCGATTTCCACGGCCGCTTCACCGCCTTCCGCCATGTCGGCGTCTTCCCCGAACAGCTCGCCCACTGGCGCTGGATGAAGGAGAAGGTCGAGACGGCCGGCCGCCCCGTCAAGGTGCTGAACCTCTTCGGCTATACCGGCGTCGCCTCGCTGGTCGCAGCGGCCGCGGGCGCGGAAGTCACCCATGTCGACGCCTCGAAGAAAGCCATCGGCTGGGCGCGCGAGAACCAGGCGCTCGGCCGCATGGAGAAGCTGCCCATCCGCTGGATCTGCGAGGATGCGATGAAGTTCATCCAGCGCGAGGAGCGCCGCGGCAGCAAATACGACATCATCCTCACCGACCCGCCGAAATTCGGCCGCGGGCCGAACGGCGAGGTCTGGCATCTCTTCGACCACCTGCCCTTGATGCTCGACATCTGCCGCGAGATCCTGTCGCCCAAGGCCATCGGCCTTGTGCTGACGGCCTATTCCATCCGCGCGAGCTTCTATTCCATCCACGAGCTGATGCGCGAGATCATGCGCGGTGCCGGCGGCACGGTGGAATCGGGCGAGCTCGTCATCCGCGAGAGCGGCCCGGACGGCGGCGAGGCCTGCCGCGCCCTCTCCACCTCCCTCTTCAGCCGATGGATCAGCGCATGA
PROTEIN sequence
Length: 355
VKDRHRRPKSGPAAPIKAKAHVRPQAAPAPKREPRPAPEAPARPLIRREGEKPAERVPVILETAGSDQYRLIDSGAGEKLEQYGPYRIVRPEAQALWQRSLPASLWDKADALFTGDTDEDGMGRWKFPKAALGETWPMQLLGVDFHGRFTAFRHVGVFPEQLAHWRWMKEKVETAGRPVKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWARENQALGRMEKLPIRWICEDAMKFIQREERRGSKYDIILTDPPKFGRGPNGEVWHLFDHLPLMLDICREILSPKAIGLVLTAYSIRASFYSIHELMREIMRGAGGTVESGELVIRESGPDGGEACRALSTSLFSRWISA*