name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_9484_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..218
|
Putative signal peptide peptidase SppA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGA2_9RHIZ
Putative signal peptide peptidase SppA {ECO:0000313|EMBL:EYR83290.1}; EC=3.4.21.- {ECO:0000313|EMBL:EYR83290.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
234..545
|
transcriptional regulator n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003653B7A
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
644..988
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D599_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83288.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1007..1408)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0L0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83287.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K09386 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1545..2609
|
Putative SAM-dependent methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXF3_9RHIZ
rbh
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:EYR83286.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SAM-dependent methyltransferase protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2606..3460
|
Putative RNA methyltransferase,TrmH family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG98_9RHIZ
rbh
Putative RNA methyltransferase,TrmH family {ECO:0000313|EMBL:EYR83285.1}; EC=2.1.1.- {ECO:0000313|EMBL:EYR83285.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spoU; rRNA methylase; K03437 RNA methyltransferase, TrmH family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3797..3931
|
Lipoprotein signal peptidase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWB4_9RHIZ
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3988..6276
|
Signal transduction histidine-protein kinase BarA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D597_9RHIZ
rbh
Signal transduction histidine-protein kinase BarA {ECO:0000313|EMBL:EYR83283.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EYR83283.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative sensor histidine kinase transmembrane protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_9484_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6376..7251
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0K5_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR83282.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
rbh
|