ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5964_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3688..4569)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJC1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 293.0
  • Bit_score: 534
  • Evalue 5.50e-149
  • rbh
Polyphosphate kinase 2, PA0141 family {ECO:0000313|EMBL:EYR83210.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 293.0
  • Bit_score: 534
  • Evalue 7.70e-149
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 287.0
  • Bit_score: 506
  • Evalue 6.60e-141
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGCGGAAAAGGCCGAAAGCCGGGCCGTGGAACTGGATATCCGCGGCAAGAAACGCGTGTTCGATATCGACGATCCGGTCCTTCCCGACTGGATCGAGGAAAAGGCCTTCGGCTCCGACGACTATCCCTATGACAAGAAACTCGACAACAAGGAATACGATCGGCTTCTCAAGCTGCTTCAGATCGAACTGGTCAAGGTCCAGTTCTGGCAGCAGAAGACGGGAACGCGCATCATGGCGGTCTTCGAGGGCCGGGACGCCGCCGGCAAGGGCGGTGCGATCCATGCCACCATGTCCTACATGAACCCGCGTTCTGCCCGCATCGTCGCGCTGACCAAGCCGACCGGCACCGAGCAGGGCCAGTGGTACTTCCAGCGCTATGTGGCGACCTTCCCGACGGCGGGCGAGTTCGTGCTCTTCGACCGCTCCTGGTACAACCGGGCCGGCGTGGAGCCGGTCATGGGCTTCTGCACGCCGGAGCAATACGAAAAGTTCCTCAAGGAAACGCCGCGCTTCGAGAAGATGATCGCCTCGGAGAACATCCATTTCTTCAAGTTCTGGCTCGACATCGGCCGCGAGATGCAGCTCAAGCGCTTCCACGACCGCCGGCACGATCCGCTGAAGGTCTGGAAGCTCTCGCCGATGGACATCGCCGCGCTCAACAAATGGGGCGACTATTCCGAAAAGCGCGACCGGATGCTGAAGGAGACGCATACGGACCAGGCACCCTGGACGGTGATCCGCGCCAACGACAAGCGCCGCGCACGCATCAACCTGATCCGGCACATCCTCAAGACGCTCGACTACGACGACAAGGACAAGGCGGCAATCGGCGAGATCGACGACAGGATCGTCGGCTCGGGACCGGGCTTCCTCAAATAG
PROTEIN sequence
Length: 294
MAEKAESRAVELDIRGKKRVFDIDDPVLPDWIEEKAFGSDDYPYDKKLDNKEYDRLLKLLQIELVKVQFWQQKTGTRIMAVFEGRDAAGKGGAIHATMSYMNPRSARIVALTKPTGTEQGQWYFQRYVATFPTAGEFVLFDRSWYNRAGVEPVMGFCTPEQYEKFLKETPRFEKMIASENIHFFKFWLDIGREMQLKRFHDRRHDPLKVWKLSPMDIAALNKWGDYSEKRDRMLKETHTDQAPWTVIRANDKRRARINLIRHILKTLDYDDKDKAAIGEIDDRIVGSGPGFLK*