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SCNpilot_expt_1000_bf_scaffold_5964_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4714..5301

Top 3 Functional Annotations

Value Algorithm Source
Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZE6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 200.0
  • Bit_score: 321
  • Evalue 6.40e-85
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 200.0
  • Bit_score: 321
  • Evalue 8.90e-85
PAS/PAC sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 186.0
  • Bit_score: 123
  • Evalue 6.10e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCTCGCAAGGGAATGGGTGGCGGTGACGGATCAGCGCACGGGCCTCGGCTGGCTGGCGACGCAACTGTGGGGCGAACGCGTTCTCATTGCCTCCGCCGTCTTCGTCGGTTTCATGATGTGGCTTGCCGGCCTGCATCTCGGCTGGGTGTCCTTCGCCGTCCTGCTCCTCGTCTTCGCCGGCCTCCTGCGCACCGAACGGCGCACGGTCGCGGTCGGCCGCAAGGCGGTGGCCGTCGAGCCGGTGGCTCCGCCCGCCCCGCCCGTGGAAGATCTCGCCGCGGTCGCCGCCGTCCTCGGCGCGCTCGATGCGCCCGCGCTGCTCCTGTCGGCGCGCCAGACGGTGAAGCTCCAGAATCGCGCGGCCGAGGTCGTCTTCGGCCCGATCCCGGAGGGCAGCGACCTTGCCGGCCGCATCCGCGCGCCCGGCATCCTCGACATGGTGCGCGATGCCATCGGCTCCGGCCAGCCGCGCGAGACGGAACATGCCGAGCGGCTTCCTTCCGAGACGGTCTATGTCGTGCGCATCGCCCCGCTCGCCGGTCCCGCCGCCGAACCGCTCTGGCTGCTGACCTTCCGCGACGTCTAG
PROTEIN sequence
Length: 196
MLAREWVAVTDQRTGLGWLATQLWGERVLIASAVFVGFMMWLAGLHLGWVSFAVLLLVFAGLLRTERRTVAVGRKAVAVEPVAPPAPPVEDLAAVAAVLGALDAPALLLSARQTVKLQNRAAEVVFGPIPEGSDLAGRIRAPGILDMVRDAIGSGQPRETEHAERLPSETVYVVRIAPLAGPAAEPLWLLTFRDV*