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SCNpilot_expt_1000_bf_scaffold_7438_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1895..2395

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:EYR78158.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 167.0
  • Bit_score: 114
  • Evalue 1.10e-22
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B77B87 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 124.0
  • Bit_score: 76
  • Evalue 4.00e-11

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
GTGGCAAGGGCTTACAGGAATCCGTCCGCACCCGAGGCAGAGTGGTCAGACACCGATGTCCTTGCAAAGGCGCATTATCTCGTCGACACCTTTCTGGCCTTCCTGCGACTGGAGCGGCCGCAGAACGACATTCTCGACACGGATTGCCTGCCGGCAAGCAAGCCTTCCCTCATCAGCGCCTTCCGGCTCGTCATCGCCACCGAGCCGCGCGGCGAGGTGCGCGAGGCGCTGTCTTGCGCCGGTCATGTCCTGGCTCAGTTTCAGAACCGGGTGGGCCCGCGCATTTGCGTGACACCGGCTCGCCCGACGCGAACACACGAACGCAGCGCGGCGGAAGGCGGCGCGCTGGAGCGCGTCCTTCGCCAGGTCGACGAAGATACCCGCCGGCTGCGCGCGCTTCTGGGGAAGGCGTCGTCGATTGCAGAGAGCCGTTTCCAGCGCAGATATGCCCGCCCGCCTTTCCAGGACGATGGAACATATACGTGGTACGGGCACTGCTAA
PROTEIN sequence
Length: 167
VARAYRNPSAPEAEWSDTDVLAKAHYLVDTFLAFLRLERPQNDILDTDCLPASKPSLISAFRLVIATEPRGEVREALSCAGHVLAQFQNRVGPRICVTPARPTRTHERSAAEGGALERVLRQVDEDTRRLRALLGKASSIAESRFQRRYARPPFQDDGTYTWYGHC*