ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7438_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7438_curated_1
unknown

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NN92_9RHIZ
SCNpilot_expt_1000_bf_scaffold_7438_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1895..2395
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR78158.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B77B87
SCNpilot_expt_1000_bf_scaffold_7438_curated_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2419..2625)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037060D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS60368.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_7438_curated_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2651..2857)
DNA (207bp) protein (69aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B8Y1_RHILS
Uncharacterized protein {ECO:0000313|EMBL:ACS60369.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_7438_curated_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3081..3434
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32769.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B30836
SCNpilot_expt_1000_bf_scaffold_7438_curated_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3429..5609)
DNA (2181bp) protein (727aa)
yxjM; putative sensor histidine kinase rbh
Putative sensor histidine kinase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TT49_TISMK rbh
Putative sensor histidine kinase {ECO:0000313|EMBL:AFK55937.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_1000_bf_scaffold_7438_curated_7
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5915..6148)
DNA (234bp) protein (78aa)
Bacterial regulatory protein, luxR family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QM50_9CAUL
Bacterial regulatory protein, luxR family protein {ECO:0000313|EMBL:EGF93622.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
response regulator protein
SCNpilot_expt_1000_bf_scaffold_7438_curated_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6495..7004
DNA (510bp) protein (170aa)
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI000372FEE3
Transporter permease {ECO:0000313|EMBL:KDR90543.1}; Flags: Fragment;; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
iron(3+)-hydroxamate import system permease protein fhuB (fragment)
SCNpilot_expt_1000_bf_scaffold_7438_curated_9
bacterium YEK0313, Bacteria

Not on your lists

7106..7306
DNA (201bp) protein (67aa)
General stress protein 69 {ECO:0000313|EMBL:CEJ15891.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Oxidoreductase n=1 Tax=Streptomyces sp. WM4235 RepID=U5YS78_9ACTO
aldo/keto reductase
SCNpilot_expt_1000_bf_scaffold_7438_curated_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7303..8253)
DNA (951bp) protein (317aa)
putative transcriptional regulatory protein,LysR family rbh
Putative transcriptional regulatory protein,LysR family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ATP8_AZOBR rbh
Putative transcriptional regulatory protein,LysR family {ECO:0000313|EMBL:CCD00809.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_7438_curated_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8350..9138
DNA (789bp) protein (263aa)
putative NAD(P)H dehydrogenase, quinone family rbh
Putative NAD(P)H dehydrogenase, quinone family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ATP7_AZOBR rbh
Putative NAD(P)H dehydrogenase, quinone family {ECO:0000313|EMBL:CCD00808.1}; EC=1.6.5.2 {ECO:0000313|EMBL:CCD00808.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_7438_curated_12
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9287..9916)
DNA (630bp) protein (210aa)
TetR family transcriptional regulator {ECO:0000313|EMBL:KHJ54553.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DXQ6_9RHIZ
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7438_curated_13
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9983..10264
DNA (282bp) protein (94aa)
Beta-lactamase {ECO:0000313|EMBL:KHJ54554.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
beta-lactamase n=1 Tax=Rhizobium leguminosarum RepID=UPI000363D2FC
beta-lactamase
Displaying 13 items

View Taxonomy