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SCNpilot_expt_1000_bf_scaffold_7438_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(9287..9916)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator {ECO:0000313|EMBL:KHJ54553.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 209.0
  • Bit_score: 336
  • Evalue 3.80e-89
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DXQ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 214.0
  • Bit_score: 243
  • Evalue 1.40e-61
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 214.0
  • Bit_score: 236
  • Evalue 6.90e-60

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Taxonomy

Aureimonas altamirensis → Aureimonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGATCGTTGTGGAAAATAAAGAATCGTTGCCCCGTCGCCGTGGTCGTCCGCCCGCCTTCGACCGCAACGACGTGCTGGAGAAGGCTGCTGAGACCTTTTGGCGGCTGGGATATGAGGGCGCTTCCATCGCCGATCTCACGGCCGCTATGGGCATCACGCCGCAGAGCCTCTACGCGGCTTTCACGTCGAAGGCCGATCTCTATCGCGAGGCGTTGGCATGGTACCAGGCCAATATCGGAGCCTCGACCGCTCGCGCCCTTGAGGAGAGCGACGTGGTGAAGGCGCTGGCTCGCGTGCTTCGGGAGTCTGCGCACGAGTTCACAAAGCCCGGTTATCCGCACGGCTGCATGGTCTCGACCGCCGTGCTGACCTGTGCCGTCGAGAACGAGCCGGTCGCGCGCCATGTGTCCAGCCTGCGCAACGAAACGCTCGATGTCATCAAGGCGCGGATCGAGCGCGGCGTTGCCGAAGGGCAATTGAAACAAGCCACCGATGCGGCAGCTCTTGCGCGCTTTGTCGGTGCGATGATTCAGGGCATGTCGGTGCAGGCGCAAGATGGCGCATCTAAGTCCGCCCTGTCGGCTATGGCGGGCCTCGCGATTGCCGAGATCGAACGTCGCCGCGTCTGA
PROTEIN sequence
Length: 210
VIVVENKESLPRRRGRPPAFDRNDVLEKAAETFWRLGYEGASIADLTAAMGITPQSLYAAFTSKADLYREALAWYQANIGASTARALEESDVVKALARVLRESAHEFTKPGYPHGCMVSTAVLTCAVENEPVARHVSSLRNETLDVIKARIERGVAEGQLKQATDAAALARFVGAMIQGMSVQAQDGASKSALSAMAGLAIAEIERRRV*