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SCNpilot_expt_1000_bf_scaffold_7438_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6495..7004

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI000372FEE3 similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 111.0
  • Bit_score: 141
  • Evalue 6.00e-31
Transporter permease {ECO:0000313|EMBL:KDR90543.1}; Flags: Fragment;; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 111.0
  • Bit_score: 141
  • Evalue 8.40e-31
iron(3+)-hydroxamate import system permease protein fhuB (fragment) similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 119.0
  • Bit_score: 136
  • Evalue 1.00e-29

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGAGAAACAATGCGCGCATCGGGAAATGCCTGCCCGATGACGCCATGCATCCATTCGCGCGTTGCGGCATGATCTTCGACCAGAAGGCAAGTGCGTTGGCGATTGTCATCGTGCATGCAAGTCCAGTAGCACCGATTGCGGTTCGTGCACTCCCACGTTCGAGGGGGGTGCACGAAATGCTGCCGCCCGGCAGGGAGATGGCGAGCGCGGCCGGCGTTTCGATCGCGCTTAGTCGCAATATCCTGCTCCTGGTCGCCGCAACGCTGACCGCAACCGCGATAATTCTTGTCGGTCCGTTGAGCTTTGCAGGGCTCATGGGACCGCATCTGGCACGACTTTGGGGATTTCAACGAGCAGGACTACATCTTGTCGCCTCGTCATTGACGGGAGGACTGATCCTGATGACGGCGGACTGGATTGGCCGCAACATCGTCTTTCCGTTCCAGGTCCCCGCAGGTCTGTTGGCGGCCGTTGTAGGAGGTGACCTTGCCCCGATGGCGAGCAGGTAG
PROTEIN sequence
Length: 170
MRNNARIGKCLPDDAMHPFARCGMIFDQKASALAIVIVHASPVAPIAVRALPRSRGVHEMLPPGREMASAAGVSIALSRNILLLVAATLTATAIILVGPLSFAGLMGPHLARLWGFQRAGLHLVASSLTGGLILMTADWIGRNIVFPFQVPAGLLAAVVGGDLAPMASR*