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SCNpilot_expt_1000_bf_scaffold_7438_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5915..6148)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory protein, luxR family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QM50_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 76.0
  • Bit_score: 101
  • Evalue 5.40e-19
Bacterial regulatory protein, luxR family protein {ECO:0000313|EMBL:EGF93622.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 76.0
  • Bit_score: 101
  • Evalue 7.50e-19
response regulator protein similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 80.0
  • Bit_score: 80
  • Evalue 2.40e-13

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Taxonomy

Asticcacaulis biprosthecium → Asticcacaulis → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
TTGAGCCATTTCCGGGCACCCGCGCCACCCGCCGACGACGCAGCGGTGCTGACCGGGCGCGAGATCGAAACCCTGACGCTGCTGGCGCGCGGGCTTACCGTGGGTGAGGTGGCCGCGCGGTTGGGACTGAAGCCGCACACCGTCGCCGGCTATGTGAAGGTCATCTACCAGAAACTCAACATCTCGACCCGGGCGGAGGCGACCCGCGAGGCCATCTATCGTCGCCTCGCCTGA
PROTEIN sequence
Length: 78
LSHFRAPAPPADDAAVLTGREIETLTLLARGLTVGEVAARLGLKPHTVAGYVKVIYQKLNISTRAEATREAIYRRLA*