ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12180_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..204

Top 3 Functional Annotations

Value Algorithm Source
Putative aldolase class 2 protein CC_1201 similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 1.10e-27
Putative aldolase class 2 protein CC_1201 n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P998_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 3.60e-27
Ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EYR79804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 1.20e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
CTCATGTATTATCTCAATCTCGCTTGCGAGATCCAGGTGGCGACGCTCTCGATGAACCGCGAGATAAAGCTGCCCGACATGTCGGTCCGCTCGAAGGTGGCCGAGCAGGCGGACGCCGTTTCCTTCGACGATGGCGATCTGGCGCTGGAATGGGACGCCCACCTGCGCCTCCTCGACCGGATCGACCGGTCCTACCGGCAATAG
PROTEIN sequence
Length: 68
LMYYLNLACEIQVATLSMNREIKLPDMSVRSKVAEQADAVSFDDGDLALEWDAHLRLLDRIDRSYRQ*