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SCNpilot_expt_1000_bf_scaffold_12180_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12180_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..204
DNA (204bp) protein (68aa)
Putative aldolase class 2 protein CC_1201
Putative aldolase class 2 protein CC_1201 n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P998_RHIML
Ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EYR79804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_12180_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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582..1070
DNA (489bp) protein (163aa)
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CK15_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EYR79803.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12180_curated_3
unknown

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comp(1096..1296)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12180_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1945..2238)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXA4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83801.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12180_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2235..3365)
DNA (1131bp) protein (377aa)
Putative GTPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0E4_9RHIZ rbh
Putative GTPase {ECO:0000313|EMBL:EYR83802.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
yjiA1; GTP-binding protein YjiA rbh
SCNpilot_expt_1000_bf_scaffold_12180_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3450..3656)
DNA (207bp) protein (69aa)
ABC transporter, substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D531_9RHIZ
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EYR83803.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mntA; manganese-binding lipoprotein MntA
SCNpilot_expt_1000_bf_scaffold_12180_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3714..4439)
DNA (726bp) protein (242aa)
ABC transporter, substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D531_9RHIZ rbh
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EYR83803.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative ABC transporter (substrate-binding protein) rbh
SCNpilot_expt_1000_bf_scaffold_12180_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4459..5325)
DNA (867bp) protein (289aa)
Manganese transport system membrane protein MntC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW55_9RHIZ rbh
Manganese transport system membrane protein MntC {ECO:0000313|EMBL:EYR83804.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
iron ABC transporter membrane spanning protein rbh
SCNpilot_expt_1000_bf_scaffold_12180_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5318..6247)
DNA (930bp) protein (310aa)
Manganese transport system ATP-binding protein MntB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG41_9RHIZ rbh
Manganese transport system ATP-binding protein MntB {ECO:0000313|EMBL:EYR83805.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
metal transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_12180_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6342..6944
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D536_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83808.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
Displaying 10 items

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