ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12180_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5318..6247)

Top 3 Functional Annotations

Value Algorithm Source
Manganese transport system ATP-binding protein MntB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG41_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 261.0
  • Bit_score: 421
  • Evalue 5.50e-115
  • rbh
Manganese transport system ATP-binding protein MntB {ECO:0000313|EMBL:EYR83805.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 261.0
  • Bit_score: 421
  • Evalue 7.70e-115
metal transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 304.0
  • Bit_score: 377
  • Evalue 4.90e-102
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGATCTTTCCTCCCGGTGGATCGGCTCGATGGGGGCTTGCGCTCTACAGGATAAACGTTATTACATTACCGAAATTCTTGGTACGTAATAACATTACCAATACCGATGATGTCAACCCCGGAGCGGCCATGACCGATATCTGCCTTCAGCTCGAGAACCTGACGCTCGGCTATGACGGCCATCCTGCCGTTCATCATCTGAGCGTGGATATCGCCCGTGGCACCCTGACGGCCGTTGTCGGGGCCAATGGCTCGGGCAAGTCGACGCTGATGAAGGCGATCGCCGGCATCCTGAAGCCCATCGGCGGAGGCTGCTCGGTTCGCTGCAAACGCCTCGCCTATCTGCCGCAGCAATCTGAACTCGACCGTAGCTTTCCGGCCCGCGTCGTCGATCTCGTGTCGCTCGGCTTCTGGCAGAGGAGGGGACTTCTCGGGCGGATCACGGCACAAGACAGGGCGGATCTCGCAAGGTGCCTCGCCGCGGTCGGCCTGACGGGTTGCGAGAAGCGACCCCTGGACAGCCTCTCCGGCGGGCAGATGCAGCGGGCGCTCTTCGCCCGCGCCATGCTGCAGGATGCCGATCTCATCCTTCTCGACGAGCCGTTCAACGCGGTCGACGGCCGCACCGTGGACGACCTTCTCGTTCTGGTGAAGCGCTGGGTCGTGGAGGGCAGGACCGTTCTTTGCGTCCTGCACGATCATGATCTTGTCCGCGCGCATGTCCCGCAGACCATGCTGCTCGCCCGTGAGCTGGTCGCCTTCGGTCCGACGCTCGACGTGCTGACACCGGACAACCTGCAACAAGCGCGCCGCTTTCAGGAGGCCTGGGACGACGAGGCGGAATGGTGCGCGCCGGAGGATGACGCGCAGCGGCAGGAACCCGGCCGGCCCGCCGAATCCGGCGACGAAAAGGGCCGGGCCTATGCTTGA
PROTEIN sequence
Length: 310
MIFPPGGSARWGLALYRINVITLPKFLVRNNITNTDDVNPGAAMTDICLQLENLTLGYDGHPAVHHLSVDIARGTLTAVVGANGSGKSTLMKAIAGILKPIGGGCSVRCKRLAYLPQQSELDRSFPARVVDLVSLGFWQRRGLLGRITAQDRADLARCLAAVGLTGCEKRPLDSLSGGQMQRALFARAMLQDADLILLDEPFNAVDGRTVDDLLVLVKRWVVEGRTVLCVLHDHDLVRAHVPQTMLLARELVAFGPTLDVLTPDNLQQARRFQEAWDDEAEWCAPEDDAQRQEPGRPAESGDEKGRAYA*