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SCNpilot_expt_1000_bf_scaffold_12180_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1945..2238)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXA4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 97.0
  • Bit_score: 166
  • Evalue 1.70e-38
Uncharacterized protein {ECO:0000313|EMBL:EYR83801.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 97.0
  • Bit_score: 166
  • Evalue 2.40e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 86.0
  • Bit_score: 94
  • Evalue 2.60e-17

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGAGCGGTGCATTTGTCAATCCGCTGTCGCGCGGCACACCGGGCGTCGTGAGCAAGGCGCGCGCCATCAAGCAATGGACACGCGAGCGACTGGCTTTACCCGGCGAGGCCGTTGTCTCGGTCAACGAACTTGCCTGCTATCTGCCGGGTTGCCCGCCGAAGGAAACGGTGGTGCTGGTGATGCTGGACGGCCGGACCGTGCAGGTCTCGATCCACAAGGCGATGCAGCAGGTCACGGAGGATGACATCGTGGATGCGTTTGCAAGGCAACATGGACGAGAGAACGGTTCGTGA
PROTEIN sequence
Length: 98
MSGAFVNPLSRGTPGVVSKARAIKQWTRERLALPGEAVVSVNELACYLPGCPPKETVVLVMLDGRTVQVSIHKAMQQVTEDDIVDAFARQHGRENGS*