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SCNpilot_expt_1000_bf_scaffold_12180_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2235..3365)

Top 3 Functional Annotations

Value Algorithm Source
Putative GTPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0E4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 374.0
  • Bit_score: 593
  • Evalue 1.70e-166
  • rbh
Putative GTPase {ECO:0000313|EMBL:EYR83802.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 374.0
  • Bit_score: 593
  • Evalue 2.30e-166
yjiA1; GTP-binding protein YjiA similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 354.0
  • Bit_score: 495
  • Evalue 1.10e-137
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGATTGGCAGCCTGTCGGCAAGCCGGAAGAAGACGTCTGCCGCGCTGAATGGGCGGGGAATAGGCCGGCTTCCCGAGCCGGTGCCCGTCACGTTGCTGACCGGCTTCCTCGGCTCCGGCAAGACGAGCCTGCTCAACAACCTTCTCGCCGATCCGCGCATGGCGGGTACCGCGGTCATCGTCAACGAGTTCGGCTCAGTCCCGATCGATCACGATCTCGTCCGTGCCGGGCGCGAGACGTATTTCCGCACGACGACGGGCTGCATCTGCTGCACCGCGACCAGCGATGTCCGGGCGTCCCTGCATGAACTGCACGCGGCGCGCCTCACAGGCGAGGTTCCGCCGGTTTCGCGCGTGGTCATCGAAACGACGGGGCTTGCCGACCCGGCCCCCATCATCAACAGCCTCATACCGGGCGGAGCGCCGGCAATGGGTCTGCGCGATCATATCGTCGCCCGGCAGTTCTATCTTTCCGGGGTGGTCACGACCTTCGACGTCATCGCCGGCCCGCCGACCCTCGATGCCCATATGGAGGGATGGAAGCAGCTCGCTTTCGCCGACCACATCGTCCTGACCAAGACGGATATCGCACAAGAGCAGGTGTCCTGGGCAGATGAACTGCGTGGCCTGAACCCGGCCGCGACCGTTCACGACAGGCAGGCGTCCGGTTTCGATCTCTTCGCACTGCTTGGTGACCGGCCCTATTCCACCCAGGACAAGGCTGACGACGTGCCGGGCTGGCTCGCCATGGAAGGTTTGGCGACCCGTCGCGATCACCGGCATGAGCGGAACCGGCAAGGCGATAAAGTCGAGGCGATCTGCCTGAGCAACGACACTCCGTTCGATCCCCGGTCGGTGATGACTTTTCTCGAGCTCGTCACCAGCAATGCCGGCGCCGGGCTCTTGCGGCTCAAAGGCATTCTCGCCGTTGCCGACGATCCGGAACGGCCGGTCGTGGCGCATGCGGTGCGCCACCGCCTCTTCCCGCTCCAAAGGCTCGACGGCTTGCCTGCCGGCGATCGAAGCACGCGCATCGTGCTGATCGGCCAGAACATGCCCGTCCAACCAATCCGGGATCTCTTCGATGTCCTGGTCCCGCGCCCCTCCTCGCGCAAACGGAGACCGGCATGA
PROTEIN sequence
Length: 377
MIGSLSASRKKTSAALNGRGIGRLPEPVPVTLLTGFLGSGKTSLLNNLLADPRMAGTAVIVNEFGSVPIDHDLVRAGRETYFRTTTGCICCTATSDVRASLHELHAARLTGEVPPVSRVVIETTGLADPAPIINSLIPGGAPAMGLRDHIVARQFYLSGVVTTFDVIAGPPTLDAHMEGWKQLAFADHIVLTKTDIAQEQVSWADELRGLNPAATVHDRQASGFDLFALLGDRPYSTQDKADDVPGWLAMEGLATRRDHRHERNRQGDKVEAICLSNDTPFDPRSVMTFLELVTSNAGAGLLRLKGILAVADDPERPVVAHAVRHRLFPLQRLDGLPAGDRSTRIVLIGQNMPVQPIRDLFDVLVPRPSSRKRRPA*