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SCNpilot_expt_1000_bf_scaffold_12180_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3450..3656)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D531_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 68.0
  • Bit_score: 125
  • Evalue 1.80e-26
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EYR83803.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 68.0
  • Bit_score: 125
  • Evalue 2.50e-26
mntA; manganese-binding lipoprotein MntA similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 68.0
  • Bit_score: 118
  • Evalue 6.90e-25

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
GTGAAGGAAGACAAGGCGTCGGCGATCTTCCTCGAGAACATCACCAATCCGCGGCTCATCGAGCAGATCGCCGGCGAAACCGGCCTCAAGGTCGGCGGCACGCTCTATTCCGACGCGCTGTCCGGCGAGGACGGCCCGGCCTCGACCTATATCGACATGTTCCACCACAACGTTGCGACGATGAAGGCGGCGATCCTCGGAAGCTGA
PROTEIN sequence
Length: 69
VKEDKASAIFLENITNPRLIEQIAGETGLKVGGTLYSDALSGEDGPASTYIDMFHHNVATMKAAILGS*