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SCNpilot_expt_1000_bf_scaffold_11271_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1..1248)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen fixation protein FixI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW36_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 416.0
  • Bit_score: 726
  • Evalue 1.40e-206
  • rbh
Nitrogen fixation protein FixI {ECO:0000313|EMBL:EYR80663.1}; EC=3.6.3.- {ECO:0000313|EMBL:EYR80663.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 416.0
  • Bit_score: 726
  • Evalue 2.00e-206
fixI; nitrogen fixation protein fixI; calcium ATPase, transmembrane domain similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 416.0
  • Bit_score: 572
  • Evalue 1.40e-160
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
GTGAGCTGCTGCGCGCCCGGCACCGAAGGCGCCGCCGACGCGGAACGCGCCCGCCATGCGCTGCCGTCCTCGGAGGAGTTGCTCCTCGCCAGCCGTCCGGTCGGCGAAGGGCTGCGCCAGAGCGACCTCAGCGTGCCGGGCGTGCATTGCGGCACCTGCATCACCACTGTCGAGGGCGCGCTGAACGCGCTGCCGGAAGTCGTGCGCGCGCGCGTCAATCTCTCCACGCGCCGCGTCTCGGTCGTCTGGAAGGAGGAGGTCGAGGGCCGGCGCATCGATCCGCAAGCTTTTGCCGCCGCCATCCGTGCCACGGGCTACGACACGCATCTCTTCTCGCTCGTCGCCGAGGGGGACGACGCGCTGCGCAACCAGCTCATCCGCGCCGTCGCCGTTTCGGGCTTCGCCGCCACCAACATCATGCTGCTCTCCGTCTCGGTCTGGTCGGGCGCGGAAGCCGCCACGCGCGACCTCTTCCACTGGATCTCCGCCTTCATCGCCGGGCCGACGCTGATCTATGCCGGCCGCTTCTTCTACAAGTCCGCCTGGAACGCCATTCGCCACGGCCGCACCAACATGGACGTGCCGATCGCGCTCGCCATCACGCTCTCCTATGCCGTCTCGCTCTGGGAGACGCTGCACAGCGCCGAGCATGCCTGGTTCGACGCGACCGTCAGCCTGCTGTTCTTCCTGCTCATCGGCCGCACGCTCGACCATGTCATGCGCGACCGCGCCCGCTCGGCCATCACCGGCCTTGCCCGCCTTTCGCCGCGCGGCGCCATGGTCGTCCGGCCCGACGGCACGCGCGACTATCGGCCCGTCGAGGAGATCGCCATCGGCGAACATCTCTCCATCGCGGCCGGCGAGCGCATCCCGGTCGATTGCCGCGTGATCGCCGGGGCCAGCGACATCGACCGCTCCATTGTCAACGGCGAGAGCGATCCGCTCGCCGCCGCGCCGGGCACGCAGCTCGAGGCCGGCGCCATGAACCTCACCGGCTCGCTCACCGTCGAGGCGACCGCTACCGCCCGCGATTCGTTCCTTTCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCATCGCCGACCGTGCGGCGCAGGTCTATTCGCCCGCCGTGCACCTCCTGGCGCTGGCCTCCTTCCTCGGCTGGGGCTTCTTCGACGGCGACTGGAAGCATGCCATGCTCGTCGCCATCGCCGTGCTGATCATCACCTGCCCCTGCGCGCTC
PROTEIN sequence
Length: 416
VSCCAPGTEGAADAERARHALPSSEELLLASRPVGEGLRQSDLSVPGVHCGTCITTVEGALNALPEVVRARVNLSTRRVSVVWKEEVEGRRIDPQAFAAAIRATGYDTHLFSLVAEGDDALRNQLIRAVAVSGFAATNIMLLSVSVWSGAEAATRDLFHWISAFIAGPTLIYAGRFFYKSAWNAIRHGRTNMDVPIALAITLSYAVSLWETLHSAEHAWFDATVSLLFFLLIGRTLDHVMRDRARSAITGLARLSPRGAMVVRPDGTRDYRPVEEIAIGEHLSIAAGERIPVDCRVIAGASDIDRSIVNGESDPLAAAPGTQLEAGAMNLTGSLTVEATATARDSFLSXXXXXXXXXXXXXXXXXRIADRAAQVYSPAVHLLALASFLGWGFFDGDWKHAMLVAIAVLIITCPCAL