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SCNpilot_expt_1000_bf_scaffold_11271_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1245..1742)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen fixation protein FixH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG26_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 165.0
  • Bit_score: 266
  • Evalue 2.10e-68
Nitrogen fixation protein FixH {ECO:0000313|EMBL:EYR80662.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 165.0
  • Bit_score: 266
  • Evalue 2.90e-68
fixH; nitrogen fixation protein FixH similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 164.0
  • Bit_score: 183
  • Evalue 4.20e-44

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGTCGCAGAACGCAAGGAACAGGGCTTCGTCTTCACCGGCTGGCACATGCTGGGCGTCATGGTGCTGTTCTTCGGAACGATCATCACGGTGAACCTCATCATGGCCTGGAACGCCTCGCATAGCTGGTCGGGCCTCGTCGTGCCCAACAGCTATGTCGCCAGCCAGGAATTCAACGAGAAGGTCGCCGCCGCCAAGGCATTCGCCGCCAGCGGCATCGAGGGCAGCCTTGCTATCGAGGGCGGCAACGTCACCTATCGCGTGGTCGACGCGAAGGGTGCGCCGGTCGTCGCCGACGACGTCTCGGCCGTCTTCAAGCGCCCGGTGGACGAGCGCGACGACTTCACCCTGCCGCTGCAGGCGGCCGGAGCGGGGCTCTTCACCGCCGAGCGCGCCATTGCCACCGGCCAGTGGGTCGTCGACATCAGCACGAAGAACGACGGCAAGAAGGTATTCCACCAGACCGTCCGGATCGTTGTCGCGGGAGGGGCGAAGTGA
PROTEIN sequence
Length: 166
MVAERKEQGFVFTGWHMLGVMVLFFGTIITVNLIMAWNASHSWSGLVVPNSYVASQEFNEKVAAAKAFAASGIEGSLAIEGGNVTYRVVDAKGAPVVADDVSAVFKRPVDERDDFTLPLQAAGAGLFTAERAIATGQWVVDISTKNDGKKVFHQTVRIVVAGGAK*