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SCNpilot_expt_1000_bf_scaffold_5136_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1178..1861)

Top 3 Functional Annotations

Value Algorithm Source
HNH nuclease similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 277
  • Evalue 3.90e-72
HNH nuclease n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I785_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 277
  • Evalue 1.20e-71
HNH nuclease {ECO:0000313|EMBL:ADP70736.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 277
  • Evalue 1.70e-71

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACCCAGACGTCCGACGCTCCCGATGTCGAAGAGATTTCCGCCAAGCTTACCAAGCTGCAGGCCGCGCTGTCCGACGGCCTGTCCCGAGAGCGCTGTCTTCGCCGATGGAGTGAGTTCATTCGAGAGCGCGATGGACACAGATGCGTCGATTGCCACTCGCGTCGTCGCCTCTCCGCGCACCACATCGCCCGGAAGTCATTTCTGACCGAGGCCCAGTTCCAGACCGGGAACGGAATTACACTCTGCAGCGCATGCCACAGAGATATGCATCGTGGCTTCAACGCGCGCCCTGACCTCAGGCTCCCCGTCGACGCACAAGGCGGAGAAAAGCTGGCTTCGATGGAGCGGCTCTACAGCATCCTCACCGATGACGCTGTCGAGCGAGACCTGATGCGGGAGGAGTTCTATTTTCTCAGCGACCAGCTGCTTGCTTCCTTCAAGAGAATGCAGGGGTACGATTCCACGACCTTCTTTCCCGGTTCGCGCATCGAGCAGGCCTACCTGATCCTCGCCGAGGGCGAACTCGGTGCGCGCCGAGCCATGGCCGAGGCTAACGGCGTACCGATGACCGACGAGCCGCTCCTGCCAGGCGGCTTGTACATGGTGCTATTAGATGATTGCGGCCGGCCCAAGAGCATTGTCGTGCAGACCTATGTGGCGCGCTCTAAGCCGCCGACGTAG
PROTEIN sequence
Length: 228
MTQTSDAPDVEEISAKLTKLQAALSDGLSRERCLRRWSEFIRERDGHRCVDCHSRRRLSAHHIARKSFLTEAQFQTGNGITLCSACHRDMHRGFNARPDLRLPVDAQGGEKLASMERLYSILTDDAVERDLMREEFYFLSDQLLASFKRMQGYDSTTFFPGSRIEQAYLILAEGELGARRAMAEANGVPMTDEPLLPGGLYMVLLDDCGRPKSIVVQTYVARSKPPT*