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SCNpilot_expt_1000_bf_scaffold_5136_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5136_curated_1
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..883
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HSE2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ66068.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_5136_curated_2
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1178..1861)
DNA (684bp) protein (228aa)
HNH nuclease
HNH nuclease n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I785_RHOVT
HNH nuclease {ECO:0000313|EMBL:ADP70736.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_expt_1000_bf_scaffold_5136_curated_3
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1896..2963)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4P273_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ88057.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
restriction endonuclease-like protein
SCNpilot_expt_1000_bf_scaffold_5136_curated_4
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3811..4272
DNA (462bp) protein (154aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
alkylhydroperoxidase
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBE0_PARDP
SCNpilot_expt_1000_bf_scaffold_5136_curated_5
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4262..5125
DNA (864bp) protein (288aa)
RNA polymerase sigma factor SigJ; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBD9_PARDP rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABL72833.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_expt_1000_bf_scaffold_5136_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5122..5841)
DNA (720bp) protein (240aa)
Putative methylated-DNA-[protein]-cysteine S-methyltransferase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUA4_9RHIZ rbh
Putative methylated-DNA-[protein]-cysteine S-methyltransferase protein {ECO:0000313|EMBL:EYR83607.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EYR83607.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
methylated-DNA--protein-cysteine S-methyltransferase protein (EC:2.1.1.63)
SCNpilot_expt_1000_bf_scaffold_5136_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6053..6547
DNA (495bp) protein (165aa)
Putative succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3A0_9RHIZ
Putative succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:EYR83608.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
succinylglutamate desuccinylase/aspartoacylase; K06987
Displaying 7 items

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