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SCNpilot_expt_1000_bf_scaffold_2774_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5727..6203)

Top 3 Functional Annotations

Value Algorithm Source
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLG4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 158.0
  • Bit_score: 286
  • Evalue 1.40e-74
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 158.0
  • Bit_score: 286
  • Evalue 2.00e-74
riboflavin synthase subunit beta; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 155.0
  • Bit_score: 232
  • Evalue 7.60e-59

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGAATGCCAATGCCACCCCCTCCGCCCGTATCGCCGTCATCCGTGCCCGCTGGCACGCCGGCATCGTCGACCAGGCGGTCACGTCCTTCATCGCCGAATGGCAGGCCCTCGGTGGCCGTGCCGAAGACGTCGACGTGATCGACGTGCCGGGCGCCCTCGAAATCCCGCTGCACGCCCAGCTCCTCGCGAGGACCGGCCGCTACGCGGCCATCCTCGGCGTCGCCCTCGTCGTCGACGGCGGCATCTACCGCCACGATTTCGTCGCCGGCAGCGTGGTCGACGCGATCGTGCGCGTCGGCCTCGACACCGGCGTGCCGGTGCTCTCGGCTGTGCTGACGCCGCACAACTTCCAGGAATCGGAAGCCCACATCGCCTTCTTCCGCGACCACTTCGTCATCAAGGGCAGGGAAGCCGCCCAGGCCGCCCGCCAGATCCTCGACGCACGGGCGCAGGTGGCACTGGCGGCGGTTTCCTGA
PROTEIN sequence
Length: 159
MNANATPSARIAVIRARWHAGIVDQAVTSFIAEWQALGGRAEDVDVIDVPGALEIPLHAQLLARTGRYAAILGVALVVDGGIYRHDFVAGSVVDAIVRVGLDTGVPVLSAVLTPHNFQESEAHIAFFRDHFVIKGREAAQAARQILDARAQVALAAVS*