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SCNpilot_expt_1000_bf_scaffold_2774_curated_17

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14994..15539

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLI5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 360
  • Evalue 1.10e-96
  • rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:EYR77706.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EYR77706.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 360
  • Evalue 1.60e-96
TRAP dicarboxylate transporter subunit DctP (EC:1.1.1.42) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 178.0
  • Bit_score: 301
  • Evalue 1.50e-79
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGAAGGACCTGGAGGGGCTGCGCCTCTACACCTTCCCGACGGCCGGCCGCTTCCTCACCCAGTTCGGCGTCGTGCCCGTCACGATCCCCTACGAGGACGCGCAGGTCGCCGTGCAGACGGGCGAGCTCGACGGCATGGCCTGGTCGGGCATCACCGAGGACTACACGGTCGGCTGGGCCGACGTGACGGACCACTTCCTGACCAACAACATCTCGGGCGCCTGGATCGGCTCCTTCTTCGTCAACGAGAAGAAGTGGGCGGAATTGCCTGACCATCTGAAGAAGCTGGTCATGACGGCCATCGAATCCGGCAACAACTACCGCGACCAGTGGTACTGGGGCGGCGAGGCGAAGCTGCGCGCCGAAGGCACGAAGCTCAAGCTCACCAGCATCCCGGCCGAGGAATGGAAGGTCGTCGAGGACGCCGCCAAGGTCTTCTGGAAGGAGATCGCCGAACAGGGCGAGACGGCCGCCAAGGTCGTCAAGATCTTCGAGGACTACAATGCCATCATCAACAAGGCCGGCCCGCCCTATGTGAACGGCTGA
PROTEIN sequence
Length: 182
VKDLEGLRLYTFPTAGRFLTQFGVVPVTIPYEDAQVAVQTGELDGMAWSGITEDYTVGWADVTDHFLTNNISGAWIGSFFVNEKKWAELPDHLKKLVMTAIESGNNYRDQWYWGGEAKLRAEGTKLKLTSIPAEEWKVVEDAAKVFWKEIAEQGETAAKVVKIFEDYNAIINKAGPPYVNG*