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SCNpilot_expt_1000_bf_scaffold_2774_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 17184..18563

Top 3 Functional Annotations

Value Algorithm Source
Succinate-semialdehyde dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EX13_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 459.0
  • Bit_score: 896
  • Evalue 1.50e-257
  • rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EYR77708.1}; EC=1.2.1.79 {ECO:0000313|EMBL:EYR77708.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 459.0
  • Bit_score: 896
  • Evalue 2.10e-257
ssdA; succinate-semialdehyde dehydrogenase (EC:1.2.1.79) similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 459.0
  • Bit_score: 813
  • Evalue 3.90e-233
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGACTGTGATCAAATGCATATCCCCCGTGGACGGCTCGGTCTATGCCGAGCGCGAGGCGATGCCGCTTGCGGCCGCGCAGGCCGTCGTCGCCCGTGCGAAGAAGGCGCAGAAGGCCTGGGCGAAGCGCCCGCTGGAGGACCGTATCCAGCTCGTCCTGAAGGGCGTCGCCCGCCTCAACGAGATGGTGGACGAGGTGGTGCCGGAAATCGCCTGGCAGATGGGCCGCCCGGTCCGCTACGGCGGCGAGTTCAAGGGCTTCAACGAGCGCTCCAACTATGTCGCGGAGATCGCCGGCTCGTCGCTCGCGCCGATCGTCATCGAGAATTCCGAGCGCTTCGAGCGCCGCATCGAACGCGAGCCGCACGGCGTCGTCTTCGTCATCGCGCCGTGGAACTATCCCTACATGACGGCGATCAATACCATCGCGCCCGCGCTGATGGCCGGCAACACGGTCATCATCAAGCACGCGGCGCAGACGCTGCTCGTCGGAGAGCGGATGGTGCGCGCCTTCAACGAGGCGGGCGTGCCGGAGGACGTCTTCCAGAACGTCTTCCTCGACCATGACACGACCTCGGCGCTGATCGCCGCCAATTCGTTCGATTTCATCAACTTCACCGGTTCGGTGGAGGGCGGCCGGTCCATCGAGCGCGCGGCCGCCGGCACCTTCACGCCGGTCGGCCTCGAACTCGGCGGCAAGGACCCGGGCTATGTCATGGAGGACGCGGACCTCGACGCCGCCGTCGACACGCTGATGGACGGCGCGACCTACAATTCGGGCCAGTGCTGCTGCGGCATCGAGCGCATCTATGTCAACGAGAAGCTCTACGACGCCTTCGTCGAGAAGTCCGTCGCCTGGGTCTCCAACTACAAGCTCGGCAACCCGCTCGACCCGGAAACGACGCTCGGGCCGATGGCGCACAAGCGCTTCGCCGCCACCGTGCGCGCGCAGATCGCCGACGCCGTTTCGAGGGGTGCGAAGGCGCTGGTCGATCCGAAGCTGTTCCCGGCCGATGACGGCGGGGCCTATGTCGCCCCGCAGATCCTTATCGATGTCGATCATTCGATGGAGTTCATGACGGAAGAGACCTTCGGCCCCGCCGTCGGCATCATGAAGGTGAAGAGCGACGCGGAAGCGCTCGCGCTGATGAACGACTGCAAGTACGGCCTCACCGTCTCGCTCTGGACGAAGGACAGCGCGCGCGCGGCCGATATCGCGCGGGATCTGGAAACCGGCACCGTCTTCATGAACCGCGCCGACTATCTCGACCCGGCGCTGTGCTGGACGGGCGTCAAGGAAACGGGCCGCGGCGGCTCGCTCTCCGTCATCGGCTTCCACAATCTTACCCGCCCGAAATCCTACCACTTCAGGAAAGCTTGA
PROTEIN sequence
Length: 460
MTVIKCISPVDGSVYAEREAMPLAAAQAVVARAKKAQKAWAKRPLEDRIQLVLKGVARLNEMVDEVVPEIAWQMGRPVRYGGEFKGFNERSNYVAEIAGSSLAPIVIENSERFERRIEREPHGVVFVIAPWNYPYMTAINTIAPALMAGNTVIIKHAAQTLLVGERMVRAFNEAGVPEDVFQNVFLDHDTTSALIAANSFDFINFTGSVEGGRSIERAAAGTFTPVGLELGGKDPGYVMEDADLDAAVDTLMDGATYNSGQCCCGIERIYVNEKLYDAFVEKSVAWVSNYKLGNPLDPETTLGPMAHKRFAATVRAQIADAVSRGAKALVDPKLFPADDGGAYVAPQILIDVDHSMEFMTEETFGPAVGIMKVKSDAEALALMNDCKYGLTVSLWTKDSARAADIARDLETGTVFMNRADYLDPALCWTGVKETGRGGSLSVIGFHNLTRPKSYHFRKA*