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SCNpilot_expt_1000_bf_scaffold_2774_curated_22

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 20891..22411

Top 3 Functional Annotations

Value Algorithm Source
Chemoreceptor McpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 507.0
  • Bit_score: 858
  • Evalue 3.70e-246
  • rbh
Chemoreceptor McpA {ECO:0000313|EMBL:EYR77711.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 507.0
  • Bit_score: 858
  • Evalue 5.20e-246
methyl-accepting chemotaxis protein McpB; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 505.0
  • Bit_score: 453
  • Evalue 8.70e-125

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
ATGAAGACAGCTCCGCCCGTCGGCCAGAACCATGACATTGTGCGCCGCCTCGACTATCTCGGGCTCGATGCCGCCGCGCTGAAGCGGCTGCGCGGCCTGAAGCCCTTCATCGAGAAGGAGCTCGGCCCGGCGCTCGACAAGTTCTATGCCATCGTGCGCCAGAGCCCGGAGGTGAACCATCTCTTCTCGAACGATGCCCATATGCAGCGCGCCAAGAACGCGCAGCTCGGCCACTGGGCGAACATCGCCGCCGGCGACTTCACCGGCGATTACGCCACCAGGGTGCAGACGATCGGCCACGTCCACGCCCGCATCGGGCTGGAACCACGCTGGTATATCGGCGGCTATGCGCTGATCGTGGAGCATCTCCTGACGGAAGCGGTGAAGGCGCTCTGGCCGAAGCAGGGATTGTTCTTTCGCCCGGAAACCGGCGCGGAAGAATTCGCTGCGCGCTTCTCCAGCCTGCTCAAGGCCATCTTCCTGGACATGGACCTGTCGATCTCCGTCTACATGGATACGTCCGACGTCGCCAAGCAGCAGGCGGTGCAGGCGCAGGTCCTCGCCGAGGAACGCCAGCTCGTCAGCGACAGTTTCGGCGCGGCGCTGAAGCGCGTTTCCGACGGCGACCTGACGGCGCGGATCACCGGCCCGCTGCCGGAAGCCTACGAGATGCTGCGGCAGGACTTCAACCATGCCATTTCGACGCTGGCTGGGGCGATCGGCAATATCGGCGCCGGCGCAGGCTCCATCCACCTCAGCGCGCGCGAGATCGCGTCGGCTTCCGACGACCTTGCCAAGCGCACCGAGCGGCAGGCGGCGAACCTGGAGGAAACGGCGGCCGCCGTCGAGGAGGTGACGACCACGGTCCGCCAGACCGCGCAGAGCGCCAACGAGGCCAATGCCCTCGTCATGGCCGCGCGCGACAATGCCCAGCGTAGCGGCGAGGTGGTGGAGGAGGCGATCACCGCCATGGGCGAGATCCAGGCGTCCTCCGCGGCGATCGCCAGCATCATCGAGGTGATCGACGAGATCGCCTTCCAGACCAACCTGCTGGCGCTCAATGCCGGCATCGAGGCCGCGCGGGCCGGGGAGGCGGGCCGCGGCTTTGCGGTTGTCGCCTCGGAAGTGCGCGCGCTCGCCCAGCGCTGCGCGGATGCCGCCAAGGACATCCAGAACCTCATCGCCAAGTCGCACGGCCAGGTCGAGGATGGCGTGCGCTCGGTGGGCGAGGTCGCCCAGTCGCTGCGCCAGATCGTCTCGCAGGTCGTGGAGGTGAGCTCCGTCTTCAACACGATCCGCGCCAGCACGGCCGAGCAGGCGACCGGCCTCCAGGCGGTCAACCAGGCGGTCAACGCAATGGACCAGATCACCCAGCAGAATGCGGCGATGGTCGAGCAGGCCAATGCCGCCAGCCAGGCGCTGACGGCGGAGGCCGCTTCCATCGCCGCCCAGCTCAGCGCCTTCCGCACCGGTGGCACCGCCCAGCCGGCCGAAAATTCCGGCTACAGCCGCGCCGCCTGA
PROTEIN sequence
Length: 507
MKTAPPVGQNHDIVRRLDYLGLDAAALKRLRGLKPFIEKELGPALDKFYAIVRQSPEVNHLFSNDAHMQRAKNAQLGHWANIAAGDFTGDYATRVQTIGHVHARIGLEPRWYIGGYALIVEHLLTEAVKALWPKQGLFFRPETGAEEFAARFSSLLKAIFLDMDLSISVYMDTSDVAKQQAVQAQVLAEERQLVSDSFGAALKRVSDGDLTARITGPLPEAYEMLRQDFNHAISTLAGAIGNIGAGAGSIHLSAREIASASDDLAKRTERQAANLEETAAAVEEVTTTVRQTAQSANEANALVMAARDNAQRSGEVVEEAITAMGEIQASSAAIASIIEVIDEIAFQTNLLALNAGIEAARAGEAGRGFAVVASEVRALAQRCADAAKDIQNLIAKSHGQVEDGVRSVGEVAQSLRQIVSQVVEVSSVFNTIRASTAEQATGLQAVNQAVNAMDQITQQNAAMVEQANAASQALTAEAASIAAQLSAFRTGGTAQPAENSGYSRAA*