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SCNpilot_expt_1000_bf_scaffold_6326_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2433..2771)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen regulatory protein P-II n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ELR9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 112.0
  • Bit_score: 212
  • Evalue 2.40e-52
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EYR79653.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 112.0
  • Bit_score: 212
  • Evalue 3.40e-52
glnB2; nitrogen regulatory protein P-II similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 112.0
  • Bit_score: 210
  • Evalue 2.20e-52

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGAAAATCGTAATGGCCATTATCAAGCCGTTCAAACTCGACGAGGTGCGCGAAGCCCTCACCGCCGTCGGCATCCAGGGCCTGACCGTGACCGAGGTGAAGGGTTACGGGCGCCAGAAGGGGCATACGGAAATCTACCGCGGCACCGAATATGCCGTCAGCTTCCTGCCGAAACTGAAGATCGAGATCGCCGTGCCCGTCGACGTCGCCGACAAGGCCGTCGAAGCGATCGCCTCGGCCGCCAAGACCGGCCAGATCGGCGACGGCAAGATCTTCGTCTACTCCATCGACCATGCCGTGCGCATCCGCACCGGCGAAACCGATTCCGAAGCCCTTTAA
PROTEIN sequence
Length: 113
MKIVMAIIKPFKLDEVREALTAVGIQGLTVTEVKGYGRQKGHTEIYRGTEYAVSFLPKLKIEIAVPVDVADKAVEAIASAAKTGQIGDGKIFVYSIDHAVRIRTGETDSEAL*