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SCNpilot_expt_1000_bf_scaffold_6433_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2..895

Top 3 Functional Annotations

Value Algorithm Source
Trehalose import ATP-binding protein SugC {ECO:0000313|EMBL:EYR83897.1}; EC=3.6.3.- {ECO:0000313|EMBL:EYR83897.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 310.0
  • Bit_score: 500
  • Evalue 2.10e-138
sugar ABC transporter ATPase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036877F1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 310.0
  • Bit_score: 443
  • Evalue 1.30e-121
  • rbh
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 306.0
  • Bit_score: 433
  • Evalue 4.20e-119
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GGCGGCGAGATCCGCATCGCCGGCAAGACCGTCAACGACCTGTCGCCGAAGGACCGCGACATCGCCATGGTGTTCCAGTCCTACGCGCTCTATCCGACGATGACCGTGCGGCAGAACATCGAGTTCGGCATGAAGATCCGCCGGATCGCCCAGGCCGACCGCGACAAGGCCGTGAAGACGGCGTCGGACCTCCTGCAGATCACCCATCTGCTCGACCGCAAGCCCTCGCAGCTCTCGGGCGGCCAGCGCCAGCGCGTCGCCATGGGCCGGGCCATCGTGCGCGAGCCGAAGCTGTTCCTCTTCGACGAGCCCCTGTCGAACCTCGACGCGAAACTCCGCGTCGACATGCGCACCGAGATCAAGCGCCTGCACGCCCGCCTCGGCACGACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCAGCTCGACGAGCCGCAGGCCGTCTACGACCGGCCGGCCAATGTCTATGTCGCGCGCTTCGTCGGTTCCCCGGCCATGAATATCGTGCCGGCCGTCCTGGAGGTCGAGGGCACGGCGGCGACCGCCGTGATCGATATCGCGCGCCGGCCGGCCGCGCGCATCGCGGGCATTTCCCTCTCCCCGGAGGCGCTGCGCCGCTATTCCGGCAGGAAGGTCCTGGTCGGCATCCGTCCGGAGAACTTCTCGATCGATACAGGTGGCGGCGCCCCGGCGCTGACCGTCGATTTCGACGTCGTCGAGCCGACAGGCCCCGATACGCTCGCCGTCTTCCAGCTCGGCGGCGTCGAGGTGACTGCCCGGCTTCCGCCGCGGCAGACCCATGCGGGCAAGGAGGCGGGGCTGGCGGTCGATACGTCCAAGATCGTGCTCTTCGACAGCGAAACCGAAACGCGTATCGACTGA
PROTEIN sequence
Length: 298
GGEIRIAGKTVNDLSPKDRDIAMVFQSYALYPTMTVRQNIEFGMKIRRIAQADRDKAVKTASDLLQITHLLDRKPSQLSGGQRQRVAMGRAIVREPKLFLFDEPLSNLDAKLRVDMRTEIKRLHARLGTTIXXXXXXXXXXXXQQLDEPQAVYDRPANVYVARFVGSPAMNIVPAVLEVEGTAATAVIDIARRPAARIAGISLSPEALRRYSGRKVLVGIRPENFSIDTGGGAPALTVDFDVVEPTGPDTLAVFQLGGVEVTARLPPRQTHAGKEAGLAVDTSKIVLFDSETETRID*