ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4728_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6034..6546)

Top 3 Functional Annotations

Value Algorithm Source
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 169.0
  • Bit_score: 219
  • Evalue 4.20e-54
3-dehydroquinate dehydratase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EG18_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 169.0
  • Bit_score: 211
  • Evalue 8.10e-52
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 162.0
  • Bit_score: 189
  • Evalue 7.90e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCGGCTTGCGCATGTGAGCATCGAGGGGCGCGGCGAGACCGACCGCTTCCTGGCCATGGTCGCGGACGCGCTCCAGGCCGAAGGGCTTCGCCTGTCGGGCGTGGTGCAGACCAATACCGCACGCGCCGACCGGCCCAAATGCGAAATGGACCTGCGCGTCCTGCCCGATGGTCCGACGCTGCGCATCAGCGAGGATCGCGGCGCGCTGGCGCGCGGCTGCATCCTCGACCACGCGGCGCTGGAACAGTCCGTTGCCGAAGTCTCGCGGCGGCTGCACGGCGCCGACGTGCTGATCGTCAACAAGTTCGGCAAGCGCGAGGCGGAGGGTCACGGAATGGTCCCCGTCATCGCCGAGGCGCTGGAGGCAGGGATTCCCGTCCTCGTCGGCGTGAACAAGCTCAACCTCGAACCGTTTCTCGCCTTTGCCGGGGAGATGTCGCTGGCGCTCCCGGCCGACATGCGGCAAGCGGTCGACTGGTGCCGGGCAAGAGAGGTTGCAGATGTCCGCTGA
PROTEIN sequence
Length: 171
MRLAHVSIEGRGETDRFLAMVADALQAEGLRLSGVVQTNTARADRPKCEMDLRVLPDGPTLRISEDRGALARGCILDHAALEQSVAEVSRRLHGADVLIVNKFGKREAEGHGMVPVIAEALEAGIPVLVGVNKLNLEPFLAFAGEMSLALPADMRQAVDWCRAREVADVR*