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SCNpilot_expt_1000_bf_scaffold_36467_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 814..1035

Top 3 Functional Annotations

Value Algorithm Source
Peroxiredoxin {ECO:0000313|EMBL:EYR77590.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 73.0
  • Bit_score: 151
  • Evalue 6.00e-34
Peroxiredoxin n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUW7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 73.0
  • Bit_score: 117
  • Evalue 5.30e-24
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 72.0
  • Bit_score: 111
  • Evalue 1.60e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGTTAGTCCCTCGAATGTCGGCCCCGGATTTGGTGGTGAAGACTCTCGATCACGGAGAGTTCGTCCTCGCCGACGAAGCGCCCAGGCTTATGACGCTCGTCTGCTTCTACCGCGGTCTCCACTGCCCCATTTGTGCAGGCTATCTAAAGGAGCTCGAACGACTGACACCATCCCTCTTGGAACGGGGCGTCAACACCATTGCAATAAGCTCTGATGGATAG
PROTEIN sequence
Length: 74
MLVPRMSAPDLVVKTLDHGEFVLADEAPRLMTLVCFYRGLHCPICAGYLKELERLTPSLLERGVNTIAISSDG*