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SCNpilot_expt_1000_bf_scaffold_36467_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1051..1350

Top 3 Functional Annotations

Value Algorithm Source
Peroxiredoxin {ECO:0000313|EMBL:EYR77590.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 205
  • Evalue 4.80e-50
alkyl hydroperoxide reductase n=1 Tax=Rhizobium leguminosarum RepID=UPI000362F2D5 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 99.0
  • Bit_score: 182
  • Evalue 2.40e-43
putative antioxidant, AhpC/TSA family similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 96.0
  • Bit_score: 160
  • Evalue 3.90e-37

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCGGATAAGATAGGTGCCGAGCATCTTCGCATTGGCTACGGCCTGTCTTTGGGCGCGGCGAAGCACTGGGGCCTGTACATTTCGGCGTCACGTGGAAAAACATCGATTGGAATCGAAGAGCCAAAATTGTTCTCCGAGCCAGGCGTGTTTTTGATCAAGCCAGACCAATCGGTCTATTGGCTCTCGGTGCAGTCCATGCCATTCGCGCGACCGAATTTCGGCGAGATGGTTCAAGCCTTGGATTTCGCCATCAAAAACGACTATCCGGCGCGCGGGGAATATATTGGCACTGTGTGA
PROTEIN sequence
Length: 100
MADKIGAEHLRIGYGLSLGAAKHWGLYISASRGKTSIGIEEPKLFSEPGVFLIKPDQSVYWLSVQSMPFARPNFGEMVQALDFAIKNDYPARGEYIGTV*