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SCNpilot_expt_1000_bf_scaffold_8754_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(220..387)

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramoyl-L-alanine amidase AmiB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXI6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 55.0
  • Bit_score: 100
  • Evalue 5.00e-19
N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:EYR82292.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EYR82292.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 55.0
  • Bit_score: 100
  • Evalue 7.10e-19
amiC; n-acetylmuramoyl-l-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 55.0
  • Bit_score: 85
  • Evalue 6.90e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
GTGCTGACCGCGCCGGACGTGCCGTCGATCCTGCTCGAACTCGGCTTCCTGTCGAACAAGGACGACGAGCAGTTGCTGGTCGACCCCGCCTGGCAGAAGAAGGTCGCGGGCCTCATCGCGGGGGCCGTGGAGCAATATCGGACCGCCATCGTCGCGAACGGCGGTTGA
PROTEIN sequence
Length: 56
VLTAPDVPSILLELGFLSNKDDEQLLVDPAWQKKVAGLIAGAVEQYRTAIVANGG*