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SCNpilot_expt_1000_bf_scaffold_8754_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 9058..10404

Top 3 Functional Annotations

Value Algorithm Source
Biotin carboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU14_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 448.0
  • Bit_score: 883
  • Evalue 7.40e-254
  • rbh
Biotin carboxylase {ECO:0000313|EMBL:EYR80769.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EYR80769.1};; EC=6.4.1.2 {ECO:0000313|EMBL:EYR80769.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 448.0
  • Bit_score: 883
  • Evalue 1.00e-253
acetyl-CoA carboxylase biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 446.0
  • Bit_score: 851
  • Evalue 1.70e-244
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGATCTCCAAAGTCCTCATCGCCAACCGCGGCGAAATCGCCCTCAGGGTCCTTCGGGCCTGCAAGGAGCTCGGCATCGCCACGGTCGCCGTGCATTCGACGGCCGACGCCGACGCCATGCATGTGCGCCTTGCCGACGAGAGCGTGTGCATCGGCCCGCCGCCGTCGCGCGAAAGCTACCTGAACATCCACCAGATCGTCGCCGCCTGCGAGATCACCGGCGCCGACGCCGTGCATCCGGGCTACGGCTTCCTGTCGGAAAACGCCAAGTTCGCGGAGATCCTCGACGCGCACGGCATCACCTTCATCGGCCCGACGGCGGAACATATCCGCATCATGGGCGACAAGATCACCGCCAAGCAGACAGCGCAGGAACTCGGCATTCCGGTCGTTCCGGGCTCCGAGGGCGAGGTGAAGCCGGAGAACGCGCTGGACGTCGCCCGCAAGATCGGCTTTCCCGTGCTCATCAAGGCCACCGCCGGCGGCGGCGGCCGCGGCATGAAGGTCGCCAAGACCGAGGCGGACCTCGATGAGGCGGTCTCGACCGCCCGTTCCGAGGCGCTCGCCGCCTTCGGCAACGACGCCGTCTACATGGAAAAGTACCTCGGCAAGCCGCGCCACATCGAAATCCAGGTCGTCGGCGACGGCATGGGCAACGCGGTGCATCTCGGCGAGCGCGACTGCTCCCTGCAGCGCCGCCACCAGAAGGTCTGGGAAGAAGCCAATTCCCCCGCCCTCAATGTCGAGCAGCGCATGAAGATCGGCCAGATCTGCGCCGACGCCATGAAGAAGCTGAAGTACCGCGGCGCCGGCACGGTCGAGTTCCTCTACGAGAACGGCGAGTTCTATTTCATCGAGATGAACACCCGCCTCCAGGTGGAGCATCCGATCACCGAGGCGATCACCGGGATCGACCTCGTGCACGAGCAGATCCGCGTCGCTTCCGGCGCAGGCCTGTCGGTCCGCCAGGAAGACATCGTCTTTTCCGGCCACGCCATCGAGTGCCGCATCAATGCCGAGGACCCGCGCACCTTCGTTCCCTCGCCGGGAACGATCACGCATTTTCATGCGCCGGGCGGCCTTGGCGTTCGCGTCGATTCGGGCGCCTATCAGGGCTACCGCATCCCGCCCTATTACGACAGCCTGATCGGCAAGCTCATCGTGCACGGGCGCACGCGCGTCGAATGCATGATGCGCCTGCGCCGCGTTCTGGACGAGTTCGTCATCGACGGCATCAAGACCACGCTGCCGCTCTTCCAGGACCTGATCGGCAACCAGGACATCGCCAACGGCGATTACGACATCCATTGGCTGGAAGACTACCTGGCCAGCAAGACCGACGCCTGA
PROTEIN sequence
Length: 449
MISKVLIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRLADESVCIGPPPSRESYLNIHQIVAACEITGADAVHPGYGFLSENAKFAEILDAHGITFIGPTAEHIRIMGDKITAKQTAQELGIPVVPGSEGEVKPENALDVARKIGFPVLIKATAGGGGRGMKVAKTEADLDEAVSTARSEALAAFGNDAVYMEKYLGKPRHIEIQVVGDGMGNAVHLGERDCSLQRRHQKVWEEANSPALNVEQRMKIGQICADAMKKLKYRGAGTVEFLYENGEFYFIEMNTRLQVEHPITEAITGIDLVHEQIRVASGAGLSVRQEDIVFSGHAIECRINAEDPRTFVPSPGTITHFHAPGGLGVRVDSGAYQGYRIPPYYDSLIGKLIVHGRTRVECMMRLRRVLDEFVIDGIKTTLPLFQDLIGNQDIANGDYDIHWLEDYLASKTDA*