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SCNpilot_expt_1000_bf_scaffold_8754_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12845..14347)

Top 3 Functional Annotations

Value Algorithm Source
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU09_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 500.0
  • Bit_score: 965
  • Evalue 2.10e-278
  • rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 500.0
  • Bit_score: 965
  • Evalue 3.00e-278
gatB; glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 500.0
  • Bit_score: 926
  • Evalue 4.50e-267
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGACCCTCGTCGACGTCCGCACCACCGATCCGAAACGCTTGATCCCCGGCGCCACCGGCGACTGGGAAGTCATCATCGGCATGGAGGTGCACGCGCAGGTCCTTTCCAATTCCAAGCTCTTCTCCGGCGCGTCGACCGAATTCGGCAAGGCGCCGAACGCCAACGTCTCGCTGGTCGATGCAGCGATGCCGGGCATGCTGCCGGTCATCAACATCGAATGCGTCAGGCAGGCGGTGCGCACGGGCCTCGGCCTGAAGGCTGAGATCAACCACCGCTCGATCTTCGACCGCAAGAACTACTTCTATCCCGACCTGCCGCAGGGCTACCAGATCTCGCAGTTCAAGGATCCGATCGTTGGCGAGGGCAAGATCACCATCTCGCTCGGCCCGGACCGCCAGGGCAATTTCGAGGATATCGAGATCGGCATCGAGCGCCTGCATCTGGAGCAGGATGCCGGAAAGTCGATGCACGACCAGCATCCGACCATGTCCTATGTCGACCTCAACCGCTCGGGCGTGGCGCTGATGGAGATCGTCTCCAAGCCGGACATGCGCTCCTCGGACGAGGCCAAGGCCTACATGACGAAGCTGCGCTCCATCGTGCGCTATCTCGGCACCTGCGACGGCAACATGGACGAGGGCTCCATGCGCGCCGACGTCAACGTCTCCGTGCGCCGCCCGGGCGAGGCCTTCGGCACGCGCTGCGAGATCAAGAACGTCAACTCCATCCGCTTCATCGGCCAGGCCATCGAATATGAGGCCCGCCGCCAGATCGGCATCCTGGAGGACGGCGGCAGCATCGACCAGGAAACCCGTCTCTTCGATCCCGGCAAGGGCGAGACGCGCTCCATGCGCTCGAAGGAAGACGCGCACGACTACCGCTATTTCCCCGATCCGGACCTCCTGCCGCTGGAATTCGACAACGAATTCGTCGGCGCGCTGCTCGCCGACCTGCCGGAACTGCCTGATGACAAGAAGATCCGCTTCGTCAAGGATCTCGGCCTTTCCGTCTACGATGCCTCGGTGCTCGTCTCGGAAAAGGCGATCGCCGACTATTACGAGGCCGTGGCCGCCGGCCGCGACGGCAAGATCGCCGCGAACTGGGTCATCAACGACTTGCTGGGCGCCTTGAACAAGGACGGCAAAGCCATTGAAGAGACTCCGGTTTCGCCCGCCCAGCTCGGCGGCATCATCGATCTCATCAAGGACGGCACCATCTCCGGCAAGATCGCCAAGGACCTCTTCGAGATCGTCTGGAACGAGGGCGGCAACCCGGCCGAGATCGTCGAGGCGCGCGGCCTCAAGCAGGTGACCGATACCGGCGCCATCGAGAAGGCCGTGGACGAGATCATCGCCGCGAACCCGGATCAGGTCGAGAAGGTCAAGGCGAAGCCGACGCTCGCCGGCTGGTTCGTCGGCCAGGTCATGAAGGCAACGGGCGGCAAGGCCAACCCGCAGGCCGTCCAGGCCCTCGTCAAGGCCAAGCTCGGCATCGAGGAGTAA
PROTEIN sequence
Length: 501
MTLVDVRTTDPKRLIPGATGDWEVIIGMEVHAQVLSNSKLFSGASTEFGKAPNANVSLVDAAMPGMLPVINIECVRQAVRTGLGLKAEINHRSIFDRKNYFYPDLPQGYQISQFKDPIVGEGKITISLGPDRQGNFEDIEIGIERLHLEQDAGKSMHDQHPTMSYVDLNRSGVALMEIVSKPDMRSSDEAKAYMTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGEAFGTRCEIKNVNSIRFIGQAIEYEARRQIGILEDGGSIDQETRLFDPGKGETRSMRSKEDAHDYRYFPDPDLLPLEFDNEFVGALLADLPELPDDKKIRFVKDLGLSVYDASVLVSEKAIADYYEAVAAGRDGKIAANWVINDLLGALNKDGKAIEETPVSPAQLGGIIDLIKDGTISGKIAKDLFEIVWNEGGNPAEIVEARGLKQVTDTGAIEKAVDEIIAANPDQVEKVKAKPTLAGWFVGQVMKATGGKANPQAVQALVKAKLGIEE*