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SCNpilot_expt_1000_bf_scaffold_45927_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(354..788)

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate regulon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0K9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 143.0
  • Bit_score: 277
  • Evalue 1.00e-71
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR78315.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 143.0
  • Bit_score: 277
  • Evalue 1.40e-71
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 144.0
  • Bit_score: 217
  • Evalue 3.90e-54

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
TTGCTGGGGCACCGACGGCTGACGGTCGTGACCAACTCCTCCGACATCGCCCGCACCCTTTCAACGGTCAACGACAACAGGGTCTACATGGCGGGCGGCGAATTGCGCAGTGACAACGGCGCCGCCTTCGGCGTCTCGGCGATCGAGTTCATCAGCCATTTCACCGTGGGCCATGCCGTGATTTCCACGGGCGCAATCGATGCCGGCATCGGGGTGATGGACTACGACTTCGAGGAGGCGGAGTTCGCCCGGGCCGTGGTCTCGCGCGGCAAGCGAGCCGTCGTCGTCACAGATCATACGAAGTTCGGCCGGCAGGGGCTGGTGCGGGTCTGCGAATTCAGCATGCTGACCGATCTTTTCACCGACAAGACGCCGCCCCGCGATGTCTCCGCCTCGCTGAAGGCGGCTGGCGTCAACGTCACGCTGGCAGGCTGA
PROTEIN sequence
Length: 145
LLGHRRLTVVTNSSDIARTLSTVNDNRVYMAGGELRSDNGAAFGVSAIEFISHFTVGHAVISTGAIDAGIGVMDYDFEEAEFARAVVSRGKRAVVVTDHTKFGRQGLVRVCEFSMLTDLFTDKTPPRDVSASLKAAGVNVTLAG*