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SCNpilot_expt_1000_bf_scaffold_45927_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1321..1491

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJA5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 57.0
  • Bit_score: 112
  • Evalue 1.30e-22
Glycine betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYR78314.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 57.0
  • Bit_score: 112
  • Evalue 1.80e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGTTTCAACCTATTCGCCTGTCAGGACTGTTTGCCGCGACGCTCTGCCTGTCCGCGGCCTTCACGATTGCGCCCGCAGCGGCGCAGGAATCCACTGCCCCCATCAAGCTGACTCTACACGACTGGACGGGCCAGCTCATCACCACCGAGATCATGGGTGAGGTGCTGAAG
PROTEIN sequence
Length: 57
MFQPIRLSGLFAATLCLSAAFTIAPAAAQESTAPIKLTLHDWTGQLITTEIMGEVLK