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SCNpilot_expt_1000_bf_scaffold_7192_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13366..14355

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin reductase TrxB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVL1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 323.0
  • Bit_score: 625
  • Evalue 3.50e-176
  • rbh
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 323.0
  • Bit_score: 625
  • Evalue 4.90e-176
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 323.0
  • Bit_score: 590
  • Evalue 3.00e-166
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGTCCGGCCAGTCCAGTAACAGCAGGCACGTCAAGGTGCTGATCATCGGCTCCGGCCCCGCCGGCTACACCGCCGCCATCTATACCGCCCGCGCCATGCTGGAGCCCGTGCTGATCGCCGGCATGGAACAGGGCGGCCAGCTCATGATCACCACCGACGTGGAAAACTACCCGGGCTATGCCGACCCGGTGCAGGGCCCGTGGATGATGGAGCAGATGCTCAAGCAGGCAGAGCATGTCGGCGCCGAGATCGTCAACGACCTCGTCACGAACGTCGACCTCGACGTGCGCCCCTTCCGCATCTCCACCGACAGCGGCACCGCATGGACCGCCGACGCGCTGATCATCGCCACCGGCGCCAAGGCCAAGTGGCTCGGCATCGACACCGAGCATAAGTTCATGGGCTTCGGCGTTTCGGCCTGCGCCACCTGCGACGGCTTCTTCTACCGGGGCAAGGATGTCGTCGTTGTCGGCGGCGGCAATTCGGCCGTCGAGGAGGCGCTCTATCTTTCGAACCTCGCCAAGACCGTGACGGTCGTGCACCGCCGCGATTCGTTCCGCGCGGAACGGATCCTGCAGGAGCGCCTGTTCGCCAAGGAGAACGTCAGGGTCGTCTGGGACCACGAGGTCGTCGAATATCTCGGCGCCGAGGCAAAGCCGCCGATGCCGGCCTCCGTCAACGGCGTGAAGCTGCGCAACGTGAAGACCGGCGAGACGCGCGACATGGAAACGGACGGCGTCTTCGTCGCGATCGGCCATGCGCCGGCAGGGGAGCTCTTCAAGGGCAAGCTGCGCCACAAGCCGAACGGCTACCTCTGGACGGCACCCGATTCCACCGCGACGGACGTGCCGGGCGTCTTTGCCGCAGGCGACGTCACGGACGACATCTACCGTCAGGCCGTAACGGCCGCCGGCATGGGCTGCATGGCGGCCCTCGAAACCGAAAAATACCTTGCAGGTCATATGCCTGTCGCAATTGCGGCCGAGTAG
PROTEIN sequence
Length: 330
MSGQSSNSRHVKVLIIGSGPAGYTAAIYTARAMLEPVLIAGMEQGGQLMITTDVENYPGYADPVQGPWMMEQMLKQAEHVGAEIVNDLVTNVDLDVRPFRISTDSGTAWTADALIIATGAKAKWLGIDTEHKFMGFGVSACATCDGFFYRGKDVVVVGGGNSAVEEALYLSNLAKTVTVVHRRDSFRAERILQERLFAKENVRVVWDHEVVEYLGAEAKPPMPASVNGVKLRNVKTGETRDMETDGVFVAIGHAPAGELFKGKLRHKPNGYLWTAPDSTATDVPGVFAAGDVTDDIYRQAVTAAGMGCMAALETEKYLAGHMPVAIAAE*