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SCNpilot_expt_1000_bf_scaffold_8355_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..672

Top 3 Functional Annotations

Value Algorithm Source
methionine ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036E5E2F similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 222.0
  • Bit_score: 405
  • Evalue 3.80e-110
  • rbh
D-methionine ABC transporter permease protein {ECO:0000313|EMBL:GAK68713.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 222.0
  • Bit_score: 371
  • Evalue 1.10e-99
metI; D-and L-methionine ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 222.0
  • Bit_score: 363
  • Evalue 6.90e-98
  • rbh

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
GCTATGTCGCCTGACATGCTTTTCGACCTGCTCTGGAAATCCCTGCTGCAGACCCTGCACATGGTGGCCGTGTCCGGCCTCGTCGGCTCGCTGATCGGCCTGCCGATCGGCGTCTTCCTCGCCACCTCCGGCAGGAACGAACTCTTCCCGGCGCCGGCGCTCAACCATGCGATCGGGCTCGTGGTCAACGCGGCGCGCTCGACGCCGTTCATCATCCTCGTCGTCGCCATCATCCCGTTCACACGCCTCCTGACGGGCACGTCGATCGGCACGACGGCGGCCATCGTGCCGCTGACCATCGCCACCGTTCCCTTCTTCGCCCGCCTCGTCGAGGCGGCGATCCGGGAGATCGACAAGGGGCTGATCGAGGCGGCCCGCGCCATGGGCGCGACGCCCATGCAGATCGTCTTCAAGGTGCTTCTCGCCGAGGCCCGCCCGGCGATCCTGCTCGCCTTCACCATGACCATCGTCAGCCTGATCGGCTATTCGGCCATGGTCGGCGCGGTCGGCGGCGGCGGTCTCGGCGACCTCGGCATCCGCTACGGCTACCAGCGCTTCATGCCGGAGGTGATGCTGGCCGTGGTGGTCGTGCTCATCGTCCTCGTGCAGCTCGTGCAGAGCGCGGGCGACGCGCTCGCCCGCCGCTTCGACAAGCGCAACCGCAAGAGCTGA
PROTEIN sequence
Length: 224
AMSPDMLFDLLWKSLLQTLHMVAVSGLVGSLIGLPIGVFLATSGRNELFPAPALNHAIGLVVNAARSTPFIILVVAIIPFTRLLTGTSIGTTAAIVPLTIATVPFFARLVEAAIREIDKGLIEAARAMGATPMQIVFKVLLAEARPAILLAFTMTIVSLIGYSAMVGAVGGGGLGDLGIRYGYQRFMPEVMLAVVVVLIVLVQLVQSAGDALARRFDKRNRKS*