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SCNpilot_expt_1000_bf_scaffold_8355_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1712..2623)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:KDP72986.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 300.0
  • Bit_score: 463
  • Evalue 1.70e-127
NosX n=1 Tax=Achromobacter cycloclastes RepID=O68482_ACHCY similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 300.0
  • Bit_score: 458
  • Evalue 6.80e-126
  • rbh
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 300.0
  • Bit_score: 414
  • Evalue 2.70e-113
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGATGCTGACCCGCCGCCGCCTGATCGCCATTTCCGCCGCGCTGGCCGTCCTGCCCGCCGTCGCGCGCGCCAATCCCGCAACCGCCCGCCTGTGGACCGGGCAGGCGCTCGGCGCGCGCGCCTCGATCCGGCTCGTCCACCCGGACGGCGAGGCTGTCGCCGCCCGCGTCATGGCCGAGATCGACCGGCTGGAGAACATCCTCAGCCTCTACCGTCCCGCCAGCGCCCTGTCGCGGCTGAACCGGGAGGGGCATCTTTCCGCCCCGCCCTTCGAGCTGCTGGAATGCCTGTCGCTGGCCGGCGCCGTGCACCATGCGAGCGGCGGGCTTTTCGACCCGACGGTGCAGCCGCTGTGGGCGCTGTGGGCGCAGGCCGCCGCCGACGGCACGCGGCCCGACGCCGGGGCGCTGGAGCGCGTGCGGCGAAAGACCGGCTGGGACAAGGTGGAGATGGATGCGGGGGCGATCACCCTCCGCCCCGGCACGGCGCTGACGCTGAACGGGATCGGCCAGGGCTATGTCGCCGACCGGGTGGCCGCGCTGCTGGAGGCCGAGGGCCTCACCGACATCCTGGTCGACACCGGCGAACTGCGCGCGCTCGGCGGCAGGCCGGAGGGCGGCGGATGGCCGGTCCGGCTGGAAACGGGCGAGCGCCTCGGGCTGCGCCAGCGGGCGCTTGCCACCTCCGCCGCGCTCGGCACGACATTCGACCAGGCCGGAAGGGACGGCCATATCCTCGATCCGAAGACCGGGATGCCGGCACCCGCAAGGTGGCGCGCCGTTTCGATCTCGGCGCCCTCCGCCGCCATCGCCGACGCGCTGGCCACGGCCGCCTGCCTGATGCCGGACAGGGACGCGATCCTCGCGCTTGCCGGCCGCTTCGACGGCGCGCGGCTGGAAAACAGCCTCTAA
PROTEIN sequence
Length: 304
MMLTRRRLIAISAALAVLPAVARANPATARLWTGQALGARASIRLVHPDGEAVAARVMAEIDRLENILSLYRPASALSRLNREGHLSAPPFELLECLSLAGAVHHASGGLFDPTVQPLWALWAQAAADGTRPDAGALERVRRKTGWDKVEMDAGAITLRPGTALTLNGIGQGYVADRVAALLEAEGLTDILVDTGELRALGGRPEGGGWPVRLETGERLGLRQRALATSAALGTTFDQAGRDGHILDPKTGMPAPARWRAVSISAPSAAIADALATAACLMPDRDAILALAGRFDGARLENSL*