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SCNpilot_expt_1000_bf_scaffold_3001_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..417

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 glutamine methyltransferase PrmB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C0S9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 138.0
  • Bit_score: 243
  • Evalue 1.60e-61
Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific {ECO:0000313|EMBL:EUB96976.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EUB96976.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 137.0
  • Bit_score: 223
  • Evalue 1.80e-55
prmB; N5-glutamine methyltransferase; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 135.0
  • Bit_score: 180
  • Evalue 3.00e-43

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
CTTTCGGCCGATGCGCTTGAAGTCGCCGAACTGAACATCGCCGAGCACGATGTCGCCGGGCAGGTGAACCTTTTCGAAGGCGACCTTTTCGCCCCGCTTGCCGGCCGGACATACGATCTCATCATCACCAACCCGCCCTATGTCGATCAGGAAGCGCTGGACGGCTATCCGCCGGAATTCCGCGCGGAGCCGAAAATGGCCCATGACGGCGGCGAGGACGGGCTCGATCTCGTCCGCCGCATCCTCGCGGACGCGCCGGCCTATCTCAATCCCGAAGGCGGCATGATCTGCGAGATCGGCTCGGGACGCGAAATCCTCGAGGAGGAGTTCCCGCATCTCGACTTCGTCTGGCTGGAAACGGAGCAATCCCAGGACGCGGTCTTCTGGATCTCCGCCGAAGCCATCGGCGTCGCCTAG
PROTEIN sequence
Length: 139
LSADALEVAELNIAEHDVAGQVNLFEGDLFAPLAGRTYDLIITNPPYVDQEALDGYPPEFRAEPKMAHDGGEDGLDLVRRILADAPAYLNPEGGMICEIGSGREILEEEFPHLDFVWLETEQSQDAVFWISAEAIGVA*