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SCNpilot_expt_1000_bf_scaffold_4531_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5775..6671)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator {ECO:0000313|EMBL:EXL01770.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 296.0
  • Bit_score: 382
  • Evalue 6.50e-103
LysR family transcriptional regulator n=1 Tax=Ochrobactrum anthropi RepID=UPI000289B17B similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 296.0
  • Bit_score: 380
  • Evalue 1.30e-102
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 296.0
  • Bit_score: 377
  • Evalue 3.60e-102
  • rbh

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Taxonomy

Ochrobactrum anthropi → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGAGCTTCGGCATCTTCGCTATTTCGTCGCGCTTGCCGAGGAGCTGCATTTTGCGCGCGCGGCCGAGCGGCTGAACATCGCGCCTCCGACCCTCACCGTGCAGATCCAGGAGATCGAGCGAAGCCTGTCGGCCCGCCTGTTGCACCGCACCAAGCGCTCCGTGGCGCTGACGCCGGCCGGCGAGATTTTCCTGGCCGAGGCGCGCAATGTACTGGACCAGTACGCGAAGGCGGAAAGCGTGGGCCGACGCGCCGGACGCGGCGAGATCGGGCGGGTCGAGATCGGCTATGTCGGATCGGCGGCCTATGCCGGTGTTCTTCAGTATCAGATGAGCGCCTTCTCGGAACGGTGGCCGGGTGTCCAGCTCAACGCCCGCGAGTTTCCCATGGACGCGTTGCCGCACCTGATCGCTGGCGGCACGGTCGACATCGGTTTTGTCCGGATGCCGGTCGCGATGCCGCGGTCGCTGCGAATGCATACGCTTCTCAGGGACTACTTCTGCCTTGCAGCGCCCTCCTCGCTCTATCGCGACATCAAGGGCGACGTCCGCGCGGCCCGCCTGTCGGGCGCTTCGTTCATCGCGCCCGAGCAGGAGTCCGGGACCTACGAAGTCGCCAAACGCGGGGGCTTCAAACCCGATATCGTCGCCGCGCCCGGCAGCCTCCTGGCCGTCCTCACCCACGTCTCGCTTGGTGCGGGCGTGGCAGTCATCCCGAGCGTGGTGCGCAATGTCGTGACCTTGCCGGGGGTTACGTTCCATCGCATCGCCGGAGAGCCCGTTTTTTCGGAAGTCGCGGCGGTCTTTCGCTCGAGCGAAAGCTCCCCGACGGTGAAGCATTTTGTCCAGCAGCTTCACAACACTCCGCCACGACAGATCAGCCCGCTTGAATGGTAA
PROTEIN sequence
Length: 299
MELRHLRYFVALAEELHFARAAERLNIAPPTLTVQIQEIERSLSARLLHRTKRSVALTPAGEIFLAEARNVLDQYAKAESVGRRAGRGEIGRVEIGYVGSAAYAGVLQYQMSAFSERWPGVQLNAREFPMDALPHLIAGGTVDIGFVRMPVAMPRSLRMHTLLRDYFCLAAPSSLYRDIKGDVRAARLSGASFIAPEQESGTYEVAKRGGFKPDIVAAPGSLLAVLTHVSLGAGVAVIPSVVRNVVTLPGVTFHRIAGEPVFSEVAAVFRSSESSPTVKHFVQQLHNTPPRQISPLEW*