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SCNpilot_expt_1000_bf_scaffold_4531_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(13530..14030)

Top 3 Functional Annotations

Value Algorithm Source
Alkaline protease secretion protein AprD {ECO:0000313|EMBL:AHK45793.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 170.0
  • Bit_score: 277
  • Evalue 1.60e-71
ABC transporter, nucleotide binding/ATPase protein (Bacteriocin) n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UEQ8_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 170.0
  • Bit_score: 259
  • Evalue 1.90e-66
rspD; bacteriocin ABC transporter ATPase; K06148 ATP-binding cassette, subfamily C, bacterial similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 166.0
  • Bit_score: 251
  • Evalue 2.20e-64

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGCCGCAGGCCATCGAGCTGATGGACGGGACGGTCGCGGAGAACATAGCGTCCTTCGATCCCGCCGCGCGCGCGGAGGATGTCATCGAGGCCGCGCGTGCGGCGCGCGTGCACGATCTTATCGTTGGCCTGCCCGAGGGCTATTCCACCGAGGTCGGCGAACATGGCCGCCAGCTCTCGGCCGGACAGAAGCAGCGCGTGGCGCTCGCCCGCGCGCTCTACGGCAGGCCGTTCCTGGTCATCCTCGACGAACCCAATTCGAACCTCGACGCGGAGGGCGAGGACGCCCTGACATCGGCGATCCTCGGCGTGCGCGAGCGCGGCGGCATCGTCGTCGTCATCGCGCACCGTCCGAGCGCGCTGCTCGCTGTCGACAAGGTGCTGATGCTTCTGGCCGGGCGCCAGCAGGCCTTCGGCCCGAAGGAAGAGGTCCTGTCGAAGGTCCTGAGGCAAACGGGCGCCCTGAAGGTCGTCCAGAACGCAGAGGCGGCAAACGCATGA
PROTEIN sequence
Length: 167
MPQAIELMDGTVAENIASFDPAARAEDVIEAARAARVHDLIVGLPEGYSTEVGEHGRQLSAGQKQRVALARALYGRPFLVILDEPNSNLDAEGEDALTSAILGVRERGGIVVVIAHRPSALLAVDKVLMLLAGRQQAFGPKEEVLSKVLRQTGALKVVQNAEAANA*