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SCNpilot_expt_1000_bf_scaffold_4021_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2674..2925)

Top 3 Functional Annotations

Value Algorithm Source
galM; aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3] similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 82.0
  • Bit_score: 148
  • Evalue 1.00e-33
Aldose 1-epimerase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A2C0_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 82.0
  • Bit_score: 148
  • Evalue 3.20e-33
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 82.0
  • Bit_score: 148
  • Evalue 4.40e-33

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGCGCAGCCCCCTCTCCGGCATCTCGCTCGAGGTCCTGACCACCGAACCCGGCGTGCAGCTCTATACGGGCGCGAAGGTGAACCCACCCGCCCCCGGCCTCGGCGGCCGCCGCTACGGCCCCTTCGCCGGCTTCTGCCTGGAAACCCAGGTCTGGCCGGACGCCGTCAACCACGAGAACTTCCCGCCCGCGGTGTTGCGGCCGGGCGAGACCTTGCGGCAGGAAACGGACTACGTCTTCCGCCGCGCATGA
PROTEIN sequence
Length: 84
VRSPLSGISLEVLTTEPGVQLYTGAKVNPPAPGLGGRRYGPFAGFCLETQVWPDAVNHENFPPAVLRPGETLRQETDYVFRRA*