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SCNpilot_expt_1000_bf_scaffold_7280_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3..2318)

Top 3 Functional Annotations

Value Algorithm Source
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 775.0
  • Bit_score: 1507
  • Evalue 0.0
glycine dehydrogenase n=1 Tax=Rhizobium giardinii RepID=UPI0003799D14 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 773.0
  • Bit_score: 1438
  • Evalue 0.0
  • rbh
gcvP; putative glycine dehydrogenase decarboxylating protein (EC:1.4.4.2) similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 773.0
  • Bit_score: 1420
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2316
ATGTCTCTTCCCAAGGACTTTGCCTTTACCGATTACCAGCCCTACGACTTCGCCAACCGTCGCCATATCGGCCCTTCGCCGAAGGAGATGGAGGCGATGCTGGCCGTGATCGGCTATGACAGCCTCGACGCGCTGATCGACGACACCGTGCCGAAATCGATCCGCCAGGAAAAGCCGCTCGAATGGGGCGCGCCGATGACCGAGCGCGAGGCGCTCGACAAGCTGCGCGAGACCGCCAACCACAACCGCAAGCTCGTCTCGCTGATCGGCCAGGGCTATTACGGCACGATCACGCCGCCGGTCATCCAGCGCAACATCCTGGAAAACCCCGCCTGGTACACGGCCTATACGCCCTACCAGCCGGAAATCAGCCAGGGGCGCCTCGAAGCGCTGCTCAACTATCAGACCATGGTCTGCGACCTGACGGGCCTCGACGTCGCCAATGCCTCGCTGCTCGACGAGGCGACCGCCGCCGCCGAGGCGATGGCCATGGCGCAGCGCGTGGCGAAATCCAAGGCAACCGCCTTCTTCGTCGACGAGAACTGCCATCCGCAGACCATCGCGCTGCTCAAGACCCGCTCCGAGCCGCTCGGCTGGAGCATTGTCGTCGGCGATCCCTTCACCGACCTCGATCCGGTGGACGTCTTCGGCGCGATCTTCCAGTATCCCGGCACCTACGGCCATGTGCGCGACTTCACCGGCCTCGTCGCCCGCCTGCACCAGACCGGCGCCATCGCCGTCATCGCGGCCGATCCGCTGGCGCTTGCCCTCCTCAAGTCTCCCGGCGACATGGATGCGGACATCGCCATCGGCTGCACCCAGCGCTTCGGCGTGCCGGTCGGCTACGGCGGCCCGCATGCGGCCTACATGGCCGTCAAAGACGCCTACAAGCGCTCCATGCCCGGCCGCCTCGTCGGCGTCTCCATCGATGCCCGCGGCAACCGCGCCTATCGCCTGTCGCTCCAGACGCGCGAGCAGCACATCCGCCGCGAGAAGGCGACGTCGAACATTTGCACCGCGCAGGTTCTGCTCGCCGTGATGGCCTCGATGTATGCCGTCTTCCATGGGCCGCAGGGCCTGAAGGCGATCGCCCAGAGCGTTCATCAGAAGACCGTTCGGCTGGCCGAGGGCCTCGAAAAGCTCGGCTACACCGTCGAGCCGGACGTCTTCTTCGACACGATCACCGTCCATGTCGGCAAGCTGCAGGGCATCATCCTGAAGACGGCCGTCGCGGAAGAGGTCAATCTCCGCAAGATCGGCGACGACCGTATCGGCATCAGTCTCGACGAGCGCTCGCGCCCCGTCACGCTGGAAGCCGTCTGGCGCGCCTTCGGCGGCGATTTCGAGGTGGCCGAGTTCGAGCCGGGCTACCGCCTGCCGGAAGACCTGCTGCGCACCAGCGAATACCTGACGCATCCGATCTTCCACATGAACCGCGCCGAAAGCGAGATGGTGCGCTACATCCGCCGGCTCTCCGACCGCGACCTCGCGCTCGACCGCGCCATGATCCCGCTCGGCTCCTGCACGATGAAGCTCAACGCCACGGCGGAGATGCTGCCGATCACCTGGCCGGAATTTGCGGAGATCCATCCCTTCGTTCCCGCCGACCAGGCGCAGGGCTACCGGCACCTCATCGAGGACCTGTCGCAGAAGCTCTGCGACATCACCGGCTACGACGCCGTTTCCATGCAGCCGAACTCCGGCGCGCAGGGCGAATATGCCGGCCTGCTGACGATCCGTGCCTATCACCTCGCCAATGGCGACACCCATCGCGACGTCTGCCTGATCCCGACCTCCGCACACGGCACCAACCCGGCCTCCGCCCAGATGGCCGGCATGAAGGTGGTCGTCGTGAAAGTGTCTGACAACGGCGACATCGACATGGAGGATTTCCGTTCCAAAGCAGAGCAGTATGCGGAAAACCTCTCGTGCTGCATGATCACCTACCCCTCAACGCACGGCGTCTTCGAGGAGAACGTGCGCGAGATCTGCGAGATCGTCCACAAGCATGGAGGCCAGGTCTATATCGACGGCGCCAACATGAACGCCATGGTCGGCCTTGCCCGGCCGGGCGACATCGGCGGCGACGTTTCGCACCTCAACCTCCACAAGACGTTCTGCATCCCGCATGGCGGCGGCGGTCCGGGCATGGGGCCGATCGGCGTCAAGGCGCATCTTGCGCCCTTCCTGCCGGCAAACCCGACGACCGGCGAGGCCGGCGCCGTCTCGGCAGCGCCTTTCGGCTCGGCCTCCATCCTGCCGATCTCCTGGAGCTACTGCCTGATGATGGGCGGCGAAGGGCTGACGCAGGCGACC
PROTEIN sequence
Length: 772
MSLPKDFAFTDYQPYDFANRRHIGPSPKEMEAMLAVIGYDSLDALIDDTVPKSIRQEKPLEWGAPMTEREALDKLRETANHNRKLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMAQRVAKSKATAFFVDENCHPQTIALLKTRSEPLGWSIVVGDPFTDLDPVDVFGAIFQYPGTYGHVRDFTGLVARLHQTGAIAVIAADPLALALLKSPGDMDADIAIGCTQRFGVPVGYGGPHAAYMAVKDAYKRSMPGRLVGVSIDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPQGLKAIAQSVHQKTVRLAEGLEKLGYTVEPDVFFDTITVHVGKLQGIILKTAVAEEVNLRKIGDDRIGISLDERSRPVTLEAVWRAFGGDFEVAEFEPGYRLPEDLLRTSEYLTHPIFHMNRAESEMVRYIRRLSDRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFAEIHPFVPADQAQGYRHLIEDLSQKLCDITGYDAVSMQPNSGAQGEYAGLLTIRAYHLANGDTHRDVCLIPTSAHGTNPASAQMAGMKVVVVKVSDNGDIDMEDFRSKAEQYAENLSCCMITYPSTHGVFEENVREICEIVHKHGGQVYIDGANMNAMVGLARPGDIGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFLPANPTTGEAGAVSAAPFGSASILPISWSYCLMMGGEGLTQAT