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SCNpilot_expt_1000_bf_scaffold_4811_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8270..9355

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU78_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 361.0
  • Bit_score: 604
  • Evalue 5.30e-170
  • rbh
tRNA-dihydrouridine synthase A {ECO:0000313|EMBL:EYR82283.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR82283.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 361.0
  • Bit_score: 604
  • Evalue 7.50e-170
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 369.0
  • Bit_score: 487
  • Evalue 5.10e-135
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGACGACGACAGGCACATTCTACCGGCAGGCCGTGGAGACGGGGACGAAGATATTCGCCACCGCGCCGATGATCGACTGGTCCGACCGGGCGTACCGCGTCTTCGCGCGGCAGCTCACGAGGAACGCGCTGCTCTTCACCGAGATGATCGTCGCCGATGCGATCCTGCGCGGCAATCGCGAGCGGCTGCTCGGCTTCGACTTGGTGGAGCAGCCGGTGGCGCTCCAGCTCGGCGGCAACAGCCCGGAAAAGCTGGCGGAGGCGGCGCGGATCGGCGAGGGGTTCGGCTATGCCGAGATCAACCTCAATGTCGGCTGCCCCTCGGACCGGGTGCAATCCGGCACCTTCGGCGCCTGCCTGATGCGCGAGCCGGACTTGGTGGTCGATTGCGTCGCGGCGATGAAGGCGGCGGTTGCCATTCCCGTGACCGTGAAATGCCGCATCGGCGTCGACGACCAGGATCCGGAAGTGGCGCTGCGCGACCTCGTCTCGAAGGTGAAGGCGGCCGGCACGGATGCCGTCTGGGTCCATGCGCGCAAGGCGTGGCTTCAGGGGCTTTCGCCGAAGGAGAATCGCGATATCCCGCCGCTCGACTATGGTCTGGTGCGGCGGCTGAAGGCGGAAAACCCGAATCTTTTCATTGGTCTCAATGGCGGGCTTCATACTTTGAGTCAGGCCGTTGAAGAGATGGATGGCCTCGACGGTGTCATGCTCGGAAGGGCTGCCTATCAGGATAGCGGCGTTCTGACGGGCGTGGACGAACTTTTTCCGCATCCGCTTCTGGGAGGCCAGCCTTCCGGTATTCCCTCCAGCCCGCAGGATCGACCGGCCGACTATTGGGAAGCGGTGCGCGACGCCATGATGGCCTATGCGGCCGAGGTGAGCGCGCGCGGCGGACGGGTGGCGCATGTGACGCGGCATATGATCGGCCTCTTCCAGGGGTTTCCGGGCGTGCGGCGCTACCGGCAGATCCTTTCGGCCGACGCCACGAAGCCCGGCGCGGGGCCGGAGGTGATCGCGGCGGCCTTCGCGGCGGTGCTGTCGGCGCGGGCCCAGGCCGAGACCGGGACCAAGGCGGCGGAATAG
PROTEIN sequence
Length: 362
MTTTGTFYRQAVETGTKIFATAPMIDWSDRAYRVFARQLTRNALLFTEMIVADAILRGNRERLLGFDLVEQPVALQLGGNSPEKLAEAARIGEGFGYAEINLNVGCPSDRVQSGTFGACLMREPDLVVDCVAAMKAAVAIPVTVKCRIGVDDQDPEVALRDLVSKVKAAGTDAVWVHARKAWLQGLSPKENRDIPPLDYGLVRRLKAENPNLFIGLNGGLHTLSQAVEEMDGLDGVMLGRAAYQDSGVLTGVDELFPHPLLGGQPSGIPSSPQDRPADYWEAVRDAMMAYAAEVSARGGRVAHVTRHMIGLFQGFPGVRRYRQILSADATKPGAGPEVIAAAFAAVLSARAQAETGTKAAE*